Factsheet for TraesCS5B01G462200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G453200.1	Wheat	extracellular	97.83	97.83
TraesCS5D01G464000.1	Wheat	extracellular	96.52	96.52
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	92.61	73.2
Zm00001d034514_P001	Maize	extracellular	69.57	70.18
EER93258	Sorghum	endoplasmic reticulum, extracellular	70.43	69.53
Os03t0804500-01	Rice	extracellular	70.43	69.53
PGSC0003DMT400063164	Potato	vacuole	51.3	53.64
PGSC0003DMT400063166	Potato	vacuole	50.0	53.0
Solyc03g113570.1.1	Tomato	vacuole	50.43	52.73
Solyc03g113580.1.1	Tomato	vacuole	49.13	52.07
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	50.0	50.44
TraesCS4B01G033500.1	Wheat	cytosol	27.83	50.0
CDY19265	Canola	extracellular	46.09	49.53
CDY26706	Canola	extracellular	45.65	49.07
AT1G18970.1	Thale cress	extracellular, vacuole	46.52	48.64
CDY21688	Canola	extracellular	45.22	48.6
CDX81907	Canola	extracellular	45.22	48.6
Bra031058.1-P	Field mustard	extracellular	45.22	48.6
Bra025704.1-P	Field mustard	extracellular	45.22	48.6
AT1G18980.1	Thale cress	extracellular	46.09	48.18
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	39.13	47.87
TraesCS4B01G033600.1	Wheat	extracellular, unclear	46.09	47.32
TraesCS4B01G033300.1	Wheat	extracellular	45.65	46.88
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	45.65	46.88
TraesCS3B01G282500.1	Wheat	extracellular	45.65	46.88
TraesCS6B01G422000.1	Wheat	extracellular	43.91	46.76
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	45.22	46.43
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	45.22	46.43
TraesCS6B01G422100.1	Wheat	extracellular	43.48	46.3
TraesCS6B01G420700.1	Wheat	extracellular	42.17	44.91
TraesCS3B01G543700.1	Wheat	extracellular	43.91	44.89
TraesCS3B01G544200.1	Wheat	extracellular	43.91	44.89
TraesCS3B01G282300.1	Wheat	extracellular	40.0	44.88
TraesCS3B01G543600.1	Wheat	extracellular	43.48	44.64
TraesCS3B01G200200.1	Wheat	extracellular	42.61	44.55
TraesCS3B01G543800.1	Wheat	extracellular	43.48	44.44
TraesCS6B01G421200.1	Wheat	extracellular	41.74	44.44
TraesCS4B01G033400.1	Wheat	extracellular	44.78	44.4
TraesCS6B01G420800.1	Wheat	extracellular	41.3	43.98
CDX68163	Canola	extracellular	41.3	43.38
TraesCS3B01G285200.1	Wheat	extracellular	41.74	43.24
Bra003784.1-P	Field mustard	extracellular	40.87	42.92
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	37.39	42.36
TraesCS3B01G544000.1	Wheat	extracellular	41.74	41.92
TraesCS1B01G098000.1	Wheat	extracellular	40.0	40.71
AT1G74820.1	Thale cress	extracellular	40.0	40.53
TraesCS6B01G041100.1	Wheat	extracellular	40.0	40.35
CDX85858	Canola	extracellular	39.57	39.74
TraesCS2B01G090300.1	Wheat	extracellular	36.09	39.15
TraesCS2B01G616500.1	Wheat	extracellular	36.09	38.25
TraesCS7B01G084000.1	Wheat	plastid	34.78	37.74
TraesCS4B01G294100.1	Wheat	extracellular	33.48	34.53

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PFscan:PS51257	PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5B01G462200	EnsemblPlants:TraesCS5B01G462200.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:637482659..637483541

Molecular Weight (calculated)

23835.6 Da

IEP (calculated)

7.042

GRAVY (calculated)

0.350

Length

230 amino acids

Sequence
(BLAST)

001: MARSRVSIMS SRVLLLIVAV AALVSACVAD PEPVQDFCVA AATNGSADHP SYPGFPCKPA SAVVSDDFFF AGLARSGAAD AAESPFGSSV TSGNVAAFPG
101: LNTLGVSINR VDLAPGGVNP LHSHPRAAEL VHVVSGQMLV GFVSTAGTFY SKVVREGESF VIPRGMVHFQ FNTGKESARA VTVFNSQLPG VVLAAPSLFG
201: ADPEIPDAVL SKSFQVDGEI IKLLKSKFRT

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.