Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G033100.1 | Wheat | golgi | 96.49 | 96.49 |
| TraesCS6A01G028700.1 | Wheat | extracellular, unclear | 95.18 | 95.18 |
| HORVU6Hr1G005420.1 | Barley | extracellular | 93.86 | 93.86 |
| Os02t0532500-01 | Rice | extracellular | 86.4 | 86.03 |
| Zm00001d016697_P001 | Maize | extracellular | 84.65 | 82.48 |
| EES06908 | Sorghum | extracellular, vacuole | 80.7 | 77.97 |
| KRG90715 | Soybean | nucleus | 48.25 | 52.63 |
| VIT_08s0007g03430.t01 | Wine grape | cytosol | 46.05 | 51.72 |
| KRH36030 | Soybean | extracellular | 40.79 | 50.27 |
| Bra034093.1-P | Field mustard | extracellular | 49.12 | 49.56 |
| CDY41321 | Canola | extracellular | 49.12 | 49.56 |
| CDY22215 | Canola | extracellular | 48.68 | 49.12 |
| PGSC0003DMT400061586 | Potato | extracellular | 45.61 | 49.06 |
| KRH30838 | Soybean | extracellular | 47.81 | 48.23 |
| KRH32736 | Soybean | extracellular, vacuole | 47.81 | 48.23 |
| Solyc11g006980.1.1 | Tomato | extracellular | 44.74 | 48.11 |
| TraesCS6B01G422000.1 | Wheat | extracellular | 39.47 | 41.67 |
| TraesCS6B01G421300.1 | Wheat | cytosol, extracellular, plastid | 33.77 | 40.96 |
| TraesCS6B01G422100.1 | Wheat | extracellular | 38.6 | 40.74 |
| TraesCS3B01G200200.1 | Wheat | extracellular | 39.04 | 40.45 |
| TraesCS3B01G543700.1 | Wheat | extracellular | 39.91 | 40.44 |
| TraesCS3B01G543600.1 | Wheat | extracellular | 39.47 | 40.18 |
| TraesCS3B01G543800.1 | Wheat | extracellular | 39.47 | 40.0 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 40.35 | 40.0 |
| TraesCS3B01G544200.1 | Wheat | extracellular | 39.04 | 39.56 |
| TraesCS6B01G420700.1 | Wheat | extracellular | 37.28 | 39.35 |
| TraesCS1B01G098000.1 | Wheat | extracellular | 38.16 | 38.5 |
| TraesCS4B01G033500.1 | Wheat | cytosol | 21.49 | 38.28 |
| AT3G10080.2 | Thale cress | mitochondrion | 49.12 | 37.58 |
| TraesCS6B01G421200.1 | Wheat | extracellular | 35.53 | 37.5 |
| TraesCS6B01G420800.1 | Wheat | extracellular | 35.53 | 37.5 |
| TraesCS3B01G544000.1 | Wheat | extracellular | 36.84 | 36.68 |
| TraesCS4B01G033100.1 | Wheat | extracellular, vacuole | 35.96 | 36.61 |
| TraesCS3B01G282400.1 | Wheat | extracellular, vacuole | 35.53 | 36.16 |
| TraesCS3B01G282500.1 | Wheat | extracellular | 35.09 | 35.71 |
| TraesCS4B01G033600.1 | Wheat | extracellular, unclear | 35.09 | 35.71 |
| TraesCS3B01G285200.1 | Wheat | extracellular | 34.65 | 35.59 |
| TraesCS4B01G033400.1 | Wheat | extracellular | 35.53 | 34.91 |
| TraesCS4B01G033300.1 | Wheat | extracellular | 34.21 | 34.82 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 33.77 | 34.53 |
| TraesCS2B01G090300.1 | Wheat | extracellular | 31.58 | 33.96 |
| TraesCS3B01G282300.1 | Wheat | extracellular | 30.26 | 33.66 |
| TraesCS2B01G127000.1 | Wheat | extracellular, vacuole | 29.82 | 33.5 |
| TraesCS7B01G084000.1 | Wheat | plastid | 31.14 | 33.49 |
| TraesCS4B01G033200.1 | Wheat | extracellular, vacuole | 32.46 | 33.04 |
| TraesCS2B01G616500.1 | Wheat | extracellular | 30.7 | 32.26 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G041100.1 | EnsemblPlantsGene:TraesCS6B01G041100 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| PANTHER:PTHR31238 | PANTHER:PTHR31238:SF8 | PFAM:PF00190 | PRINTS:PR00325 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00835 | SUPFAM:SSF51182 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:25550987..25551673
Molecular Weight (calculated)
24242.1 Da
IEP (calculated)
7.145
GRAVY (calculated)
0.101
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MATHHRALLL LLAVLLPAAA FADPDAVQDF CVPDPGRGRP VELNLIRSYP CRNPANLTAG DFAFSGVRAA GNFSADTGFA GVSVTPAQFP GLHTLGMSFA
101: RADLSAAGGV NPPHYHPRAT ETALVLAGRV YAGFVDTAGR LFAKVLVEGE VMVFPRGMVH FQLNVGDQPA TVYGTFNSEN PGIVRVPATV FGSGIRDAVL
201: ERAFGLSPEE LRRIEKRFGV PKKAELED
101: RADLSAAGGV NPPHYHPRAT ETALVLAGRV YAGFVDTAGR LFAKVLVEGE VMVFPRGMVH FQLNVGDQPA TVYGTFNSEN PGIVRVPATV FGSGIRDAVL
201: ERAFGLSPEE LRRIEKRFGV PKKAELED
001: MYRPNHSHNQ NHISKRGFSF GTKTHTLISQ TKFWLIKSNH LNQSLIYPHQ IYICLFKPDV TQLFFTWTSS KMEANTLFLL KALCLLCFNV CFTLASDPDP
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH
Arabidopsis Description
RmlC-like cupins superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.