Factsheet for AT3G10080.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 1
vacuole 2
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22215	Canola	extracellular	67.45	88.94
CDY41321	Canola	extracellular	67.11	88.5
Bra034093.1-P	Field mustard	extracellular	66.78	88.05
KRH30838	Soybean	extracellular	48.32	63.72
KRH32736	Soybean	extracellular, vacuole	47.32	62.39
VIT_08s0007g03430.t01	Wine grape	cytosol	40.27	59.11
Os02t0532500-01	Rice	extracellular	38.26	49.78
TraesCS6D01G033100.1	Wheat	golgi	37.92	49.56
TraesCS6B01G041100.1	Wheat	extracellular	37.58	49.12
TraesCS6A01G028700.1	Wheat	extracellular, unclear	37.58	49.12
HORVU6Hr1G005420.1	Barley	extracellular	37.58	49.12
Zm00001d016697_P001	Maize	extracellular	37.25	47.44
EES06908	Sorghum	extracellular, vacuole	37.25	47.03
AT1G18970.1	Thale cress	extracellular, vacuole	29.53	40.0
AT1G18980.1	Thale cress	extracellular	28.86	39.09
AT3G05930.1	Thale cress	extracellular	27.52	37.44
AT1G09560.1	Thale cress	extracellular	26.85	36.53
AT1G72610.1	Thale cress	extracellular, vacuole	25.17	36.06
AT5G26700.1	Thale cress	extracellular, vacuole	25.5	35.68
AT3G62020.1	Thale cress	extracellular, vacuole	25.5	34.55
AT1G02335.1	Thale cress	extracellular, vacuole	25.17	34.25
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	24.16	34.12
AT1G10460.1	Thale cress	extracellular, vacuole	23.83	32.72
AT1G74820.1	Thale cress	extracellular	24.5	32.16

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:820169	UniProt:A0A1I9LSI8	ProteinID:ANM65546.1	ArrayExpress:AT3G10080
EnsemblPlantsGene:AT3G10080	RefSeq:AT3G10080	TAIR:AT3G10080	RefSeq:AT3G10080-TAIR-G	EnsemblPlants:AT3G10080.2	Unigene:At.39994
InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145
GO:GO:0045735	GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	RefSeq:NP_001327505.1	PFAM:PF00190
PRINTS:PR00325	PANTHER:PTHR31238	PANTHER:PTHR31238:SF48	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	UniParc:UPI0008491D34	SEG:seg	:	:	:

Description

RmlC-like cupins superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI8]

Coordinates

chr3:-:3107275..3108385

Molecular Weight (calculated)

33258.0 Da

IEP (calculated)

8.579

GRAVY (calculated)

-0.161

Length

298 amino acids

Sequence
(BLAST)

001: MYRPNHSHNQ NHISKRGFSF GTKTHTLISQ TKFWLIKSNH LNQSLIYPHQ IYICLFKPDV TQLFFTWTSS KMEANTLFLL KALCLLCFNV CFTLASDPDP
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.