Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11164 | Canola | extracellular, vacuole | 90.38 | 90.82 |
| CDX68260 | Canola | extracellular, vacuole | 89.9 | 90.34 |
| Bra003874.1-P | Field mustard | extracellular | 89.42 | 89.86 |
| CDX72929 | Canola | vacuole | 86.54 | 82.95 |
| CDX96421 | Canola | vacuole | 86.06 | 82.49 |
| Bra016047.1-P | Field mustard | vacuole | 86.06 | 82.49 |
| KRH06186 | Soybean | extracellular, vacuole | 66.83 | 66.51 |
| KRH47600 | Soybean | extracellular | 66.83 | 66.51 |
| AT5G20630.1 | Thale cress | extracellular, plasma membrane, vacuole | 63.94 | 63.03 |
| Os08t0460000-01 | Rice | extracellular | 60.58 | 59.15 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 60.1 | 58.96 |
| TraesCS2B01G090300.1 | Wheat | extracellular | 60.1 | 58.96 |
| TraesCS2D01G073700.1 | Wheat | extracellular | 60.1 | 58.96 |
| TraesCS7A01G178300.1 | Wheat | extracellular | 59.62 | 58.49 |
| TraesCS7B01G084000.1 | Wheat | plastid | 59.62 | 58.49 |
| TraesCS7D01G180200.1 | Wheat | extracellular, vacuole | 59.62 | 58.49 |
| TraesCS2A01G075000.1 | Wheat | extracellular | 59.62 | 58.22 |
| TraesCS2D01G073600.1 | Wheat | extracellular | 57.21 | 57.21 |
| Zm00001d037513_P001 | Maize | plastid | 57.21 | 56.13 |
| EES17780 | Sorghum | extracellular, vacuole | 57.69 | 54.3 |
| GSMUA_Achr9P16110_001 | Banana | plasma membrane, plastid, vacuole | 64.9 | 52.73 |
| GSMUA_Achr2P18710_001 | Banana | extracellular | 62.5 | 52.0 |
| CDX82141 | Canola | vacuole | 51.92 | 48.87 |
| AT1G18980.1 | Thale cress | extracellular | 41.83 | 39.55 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 40.87 | 38.64 |
| AT1G09560.1 | Thale cress | extracellular | 40.38 | 38.36 |
| AT1G02335.1 | Thale cress | extracellular, vacuole | 39.42 | 37.44 |
| AT3G62020.1 | Thale cress | extracellular, vacuole | 38.46 | 36.36 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 36.54 | 35.68 |
| AT3G05930.1 | Thale cress | extracellular | 37.5 | 35.62 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 36.54 | 35.02 |
| AT1G74820.1 | Thale cress | extracellular | 33.17 | 30.4 |
| AT3G10080.2 | Thale cress | mitochondrion | 36.06 | 25.17 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:843593 | UniProt:A0A178WCD6 | ProteinID:AAD05223.1 | ProteinID:AAG51848.1 |
| ProteinID:AEE35348.1 | EMBL:AF083709 | ArrayExpress:AT1G72610 | EnsemblPlantsGene:AT1G72610 | RefSeq:AT1G72610 | TAIR:AT1G72610 |
| RefSeq:AT1G72610-TAIR-G | EnsemblPlants:AT1G72610.1 | TAIR:AT1G72610.1 | EMBL:AY085951 | Unigene:At.75222 | ProteinID:BAA77207.1 |
| InterPro:Cupin_1 | Symbol:GLP1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0031012 | GO:GO:0045735 |
| GO:GO:0046872 | GO:GO:0048046 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | RefSeq:NP_177405.1 |
| ProteinID:OAP15744.1 | UniProt:P94040 | PFAM:PF00190 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 |
| PANTHER:PTHR31238:SF92 | UniProt:Q549N9 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 |
| SignalP:SignalP-noTM | EMBL:U75189 | EMBL:U75190 | EMBL:U75196 | EMBL:U75197 | EMBL:U75201 |
| EMBL:U75206 | EMBL:U95034 | EMBL:U95035 | UniParc:UPI0000001406 | EMBL:X91921 | SEG:seg |
Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
Coordinates
chr1:-:27339114..27340044
Molecular Weight (calculated)
21560.3 Da
IEP (calculated)
9.711
GRAVY (calculated)
0.510
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.