Factsheet for Bra002316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85429	Canola	extracellular	100.0	100.0
CDX92448	Canola	extracellular	100.0	100.0
CDY16549	Canola	extracellular	100.0	100.0
CDY22866	Canola	extracellular	100.0	100.0
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	95.73	95.73
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	93.36	93.36
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	92.42	92.42
Bra020115.1-P	Field mustard	extracellular	77.73	77.36
Bra020114.1-P	Field mustard	extracellular, vacuole	78.2	75.34
KRH02617	Soybean	nucleus	69.67	70.67
KRH12528	Soybean	extracellular	67.3	66.67
VIT_18s0086g00590.t01	Wine grape	cytosol	38.86	66.67
PGSC0003DMT400036428	Potato	extracellular	63.98	64.9
Solyc03g123410.1.1	Tomato	nucleus	63.98	64.9
PGSC0003DMT400030317	Potato	extracellular	63.51	64.42
Bra003874.1-P	Field mustard	extracellular	63.03	64.25
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	28.44	60.61
Bra016047.1-P	Field mustard	vacuole	61.61	59.91
VIT_09s0002g01320.t01	Wine grape	extracellular	58.77	59.33
TraesCS2D01G073700.1	Wheat	extracellular	59.24	58.96
TraesCS2B01G090300.1	Wheat	extracellular	59.24	58.96
VIT_18s0086g00410.t01	Wine grape	extracellular	58.29	58.85
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	58.77	58.49
TraesCS2A01G075000.1	Wheat	extracellular	58.77	58.22
Os08t0460000-01	Rice	extracellular	58.77	58.22
TraesCS7A01G178300.1	Wheat	extracellular	58.29	58.02
TraesCS7B01G084000.1	Wheat	plastid	58.29	58.02
HORVU7Hr1G036720.1	Barley	extracellular	57.82	57.55
TraesCS2D01G073600.1	Wheat	extracellular	56.4	57.21
KRH19305	Soybean	cytosol, extracellular, plastid	57.82	56.22
Zm00001d037513_P001	Maize	plastid	56.4	56.13
VIT_07s0005g05920.t01	Wine grape	extracellular	54.98	55.5
EES17780	Sorghum	extracellular, vacuole	56.87	54.3
VIT_07s0005g05930.t01	Wine grape	extracellular	53.55	54.07
VIT_07s0005g05910.t01	Wine grape	extracellular	53.55	54.07
VIT_12s0059g00740.t01	Wine grape	cytosol	30.81	52.85
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	62.56	51.56
GSMUA_Achr2P18710_001	Banana	extracellular	59.24	50.0
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	52.61	44.76
Bra009907.1-P	Field mustard	cytosol	33.18	38.04
Bra031671.1-P	Field mustard	extracellular	38.86	37.96
Bra007652.1-P	Field mustard	extracellular	39.34	37.73
Bra033314.1-P	Field mustard	extracellular, vacuole	38.86	37.61
Bra020014.1-P	Field mustard	extracellular	39.34	37.22
Bra031058.1-P	Field mustard	extracellular	37.44	36.92
Bra030785.1-P	Field mustard	extracellular	38.39	36.82
Bra036586.1-P	Field mustard	extracellular	37.44	36.41
Bra020528.1-P	Field mustard	extracellular	37.44	36.24
Bra040244.1-P	Field mustard	extracellular	37.44	36.24
Bra031430.1-P	Field mustard	extracellular	31.28	35.11
Bra025704.1-P	Field mustard	extracellular	35.55	35.05
Bra020798.1-P	Field mustard	extracellular	35.07	34.1
Bra001173.1-P	Field mustard	extracellular, vacuole	34.12	33.03
Bra034093.1-P	Field mustard	extracellular	33.65	31.42
Bra003784.1-P	Field mustard	extracellular	31.28	30.14
Bra031713.1-P	Field mustard	vacuole	25.12	27.89

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra002316	EnsemblPlants:Bra002316.1	EnsemblPlants:Bra002316.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M4CDN5	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0002544C0C	SEG:seg	:

Description

AT5G20630 (E=4e-101) GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase

Coordinates

chrA10:+:10356003..10356638

Molecular Weight (calculated)

21902.4 Da

IEP (calculated)

6.508

GRAVY (calculated)

0.366

Length

211 amino acids

Sequence
(BLAST)

001: MKMIIHIFFI LSLVSSTSFA SVLDFCVADP KGPQNPSGYS CKNPDQVTEN DFAFSGLAKA GNTSNIIKAA VTPAFAPAFA GLNGLDVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIS AGFISSANKV YLKTLSRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDEEV
201: KKLKGVLGGT N

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.