Factsheet for Bra040244.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18833	Canola	extracellular	99.54	99.54
Bra031430.1-P	Field mustard	extracellular	79.36	92.02
Bra001173.1-P	Field mustard	extracellular, vacuole	84.86	84.86
AT3G05930.1	Thale cress	extracellular	82.57	82.19
Bra020798.1-P	Field mustard	extracellular	80.28	80.65
Bra009907.1-P	Field mustard	cytosol	53.21	63.04
Bra036586.1-P	Field mustard	extracellular	61.01	61.29
Bra020528.1-P	Field mustard	extracellular	60.55	60.55
Bra031671.1-P	Field mustard	extracellular	56.42	56.94
Bra020014.1-P	Field mustard	extracellular	56.42	55.16
Bra030785.1-P	Field mustard	extracellular	55.5	55.0
Bra007652.1-P	Field mustard	extracellular	55.05	54.55
Bra033314.1-P	Field mustard	extracellular, vacuole	51.83	51.83
Bra025704.1-P	Field mustard	extracellular	43.58	44.39
Bra031058.1-P	Field mustard	extracellular	42.2	42.99
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.16	38.39
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.16	38.39
Bra003784.1-P	Field mustard	extracellular	38.53	38.36
Bra020115.1-P	Field mustard	extracellular	36.7	37.74
Bra002316.1-P	Field mustard	extracellular	36.24	37.44
Bra003874.1-P	Field mustard	extracellular	33.95	35.75
Bra020114.1-P	Field mustard	extracellular, vacuole	35.78	35.62
Bra016047.1-P	Field mustard	vacuole	34.86	35.02
Bra031713.1-P	Field mustard	vacuole	28.9	33.16
Bra034093.1-P	Field mustard	extracellular	33.03	31.86

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra040244	EnsemblPlants:Bra040244.1	EnsemblPlants:Bra040244.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4FGL6	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002544CEA	:	:	:

Description

AT3G05930 (E=5e-102) GLP8 | GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir

Coordinates

chrA01:-:28291189..28292056

Molecular Weight (calculated)

23207.9 Da

IEP (calculated)

7.620

GRAVY (calculated)

0.045

Length

218 amino acids

Sequence
(BLAST)

001: MATSMIYLFV TILLVAAHTA FAESNMLQDF CVADLKGEKV NGYPCKDPAQ VTPEDFYYIG LANGASTTNT TLGSAVTGAN VEKIPGLNTL GISMSRIDYA
101: PGGLNPPHLH PRASEAIFVL EGRLFVGFLT TAGKLISKHV NKGDVFVFPR ALLHFQQNPN NAPASVLAAF DSQNSGAQGV GPSLFGANPP IPDDLLAKAF
201: YLEPQEVQKV KGKFPAKK

Best Arabidopsis Sequence Match ( AT3G05930.1 )
(BLAST)

001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK

Arabidopsis Description

GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.