Factsheet for Bra036586.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19762	Canola	extracellular	99.54	99.54
CDX87040	Canola	extracellular	99.08	99.08
Bra009907.1-P	Field mustard	cytosol	75.58	89.13
Bra020528.1-P	Field mustard	extracellular	88.48	88.07
AT5G26700.1	Thale cress	extracellular, vacuole	83.41	84.98
Bra040244.1-P	Field mustard	extracellular	61.29	61.01
Bra020798.1-P	Field mustard	extracellular	59.45	59.45
Bra001173.1-P	Field mustard	extracellular, vacuole	59.45	59.17
Bra031430.1-P	Field mustard	extracellular	50.69	58.51
Bra031671.1-P	Field mustard	extracellular	58.06	58.33
Bra020014.1-P	Field mustard	extracellular	56.68	55.16
Bra030785.1-P	Field mustard	extracellular	55.76	55.0
Bra007652.1-P	Field mustard	extracellular	53.46	52.73
Bra033314.1-P	Field mustard	extracellular, vacuole	52.07	51.83
Bra031058.1-P	Field mustard	extracellular	39.63	40.19
Bra025704.1-P	Field mustard	extracellular	39.17	39.72
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.33	38.39
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.33	38.39
Bra002316.1-P	Field mustard	extracellular	36.41	37.44
Bra020115.1-P	Field mustard	extracellular	35.94	36.79
Bra003874.1-P	Field mustard	extracellular	35.02	36.72
Bra034093.1-P	Field mustard	extracellular	37.33	35.84
Bra020114.1-P	Field mustard	extracellular, vacuole	35.94	35.62
Bra016047.1-P	Field mustard	vacuole	35.02	35.02
Bra003784.1-P	Field mustard	extracellular	33.64	33.33
Bra031713.1-P	Field mustard	vacuole	29.03	33.16

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra036586	EnsemblPlants:Bra036586.1	EnsemblPlants:Bra036586.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M4F677	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0002541D0C	:	:

Description

AT5G26700 (E=5e-097) | germin-like protein, putative

Coordinates

chrA09:-:1865168..1865896

Molecular Weight (calculated)

23007.0 Da

IEP (calculated)

9.569

GRAVY (calculated)

0.210

Length

217 amino acids

Sequence
(BLAST)

001: MASTATHLVV VVTMLVSAMA VAESNMLQDF CVADLSNAVK VNGYTCKDST QVTPEDFYFQ GLATAKAAAN SSTGAIVTGA TVEKLPGLNT LGLSMSRIDY
101: APNGLNPPHV HPRASEVIFV LEGQLYVGFV TTAGKLVAKY INKGEVFVFP KGLLHFQKNI AGSAPASVLA AFDSQLPGTQ SLVASLFGAL PDNILVESFK
201: IKPKQVKTIK SRYQPKK

Best Arabidopsis Sequence Match ( AT5G26700.1 )
(BLAST)

001: MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK

Arabidopsis Description

Probable germin-like protein subfamily 2 member 5 [Source:UniProtKB/Swiss-Prot;Acc:O65252]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.