Factsheet for Bra020528.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05519	Canola	extracellular	96.79	96.79
Bra009907.1-P	Field mustard	cytosol	76.15	90.22
Bra036586.1-P	Field mustard	extracellular	88.07	88.48
AT5G26700.1	Thale cress	extracellular, vacuole	81.65	83.57
Bra020798.1-P	Field mustard	extracellular	60.55	60.83
Bra040244.1-P	Field mustard	extracellular	60.55	60.55
Bra001173.1-P	Field mustard	extracellular, vacuole	59.17	59.17
Bra031430.1-P	Field mustard	extracellular	50.0	57.98
Bra031671.1-P	Field mustard	extracellular	57.34	57.87
Bra030785.1-P	Field mustard	extracellular	55.05	54.55
Bra020014.1-P	Field mustard	extracellular	55.05	53.81
Bra033314.1-P	Field mustard	extracellular, vacuole	52.75	52.75
Bra007652.1-P	Field mustard	extracellular	53.21	52.73
Bra031058.1-P	Field mustard	extracellular	41.28	42.06
Bra025704.1-P	Field mustard	extracellular	40.83	41.59
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.61	38.86
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.16	38.39
Bra002316.1-P	Field mustard	extracellular	36.24	37.44
Bra003874.1-P	Field mustard	extracellular	35.32	37.2
Bra020115.1-P	Field mustard	extracellular	35.78	36.79
Bra020114.1-P	Field mustard	extracellular, vacuole	35.32	35.16
Bra034093.1-P	Field mustard	extracellular	35.78	34.51
Bra016047.1-P	Field mustard	vacuole	33.95	34.1
Bra003784.1-P	Field mustard	extracellular	33.49	33.33
Bra031713.1-P	Field mustard	vacuole	28.9	33.16

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra020528	EnsemblPlants:Bra020528.1	EnsemblPlants:Bra020528.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M4DVI4	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002546E66	:

Description

AT5G26700 (E=4e-095) | germin-like protein, putative

Coordinates

chrA02:-:24754805..24755644

Molecular Weight (calculated)

23121.1 Da

IEP (calculated)

9.307

GRAVY (calculated)

0.226

Length

218 amino acids

Sequence
(BLAST)

001: MASVATHIVV VVTMLVSAMA VASESNMLQD ICVADLSNAV KVNGYTCKDG TQVTPEDFYF QGLASPSAAS NTSTGAIVTG ATVEKLPGLN TLGLSMSRID
101: YAPNGLNPPH VHPRASEIIY VLEGQLYVGF VTTAGKLVAK YVNKGEVFVF PKGLLHFQKN IAKSAPASVI AAFDSQLPGT QSLVSSLFGA LPEDILVKSF
201: QFKAIPVNKI KSRYQPKK

Best Arabidopsis Sequence Match ( AT5G26700.1 )
(BLAST)

001: MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK

Arabidopsis Description

Probable germin-like protein subfamily 2 member 5 [Source:UniProtKB/Swiss-Prot;Acc:O65252]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.