Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G088800.1 | Wheat | cytosol | 28.38 | 53.28 |
| TraesCSU01G057500.1 | Wheat | extracellular | 47.6 | 48.44 |
| TraesCSU01G057600.1 | Wheat | extracellular | 42.36 | 45.33 |
| TraesCSU01G137500.1 | Wheat | extracellular, plasma membrane, vacuole | 29.26 | 24.19 |
Protein Annotations
| EnsemblPlants:TraesCSU01G172100.1 | EnsemblPlantsGene:TraesCSU01G172100 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll |
| InterPro:RmlC_Cupin_sf | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF94 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00835 | SUPFAM:SSF51182 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrUn:-:254191411..254192303
Molecular Weight (calculated)
24830.8 Da
IEP (calculated)
8.252
GRAVY (calculated)
0.035
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSSFLLL AVLLALVSWQ ATASDPSPLQ DFCVADMNSP VRVNGFVCKN PMEVNADNFF KAAALDKPRV TNKVGSNVTL INVMQIAGLN TLGISIVRID
101: YAPLGQNPPH THPRATEILT VLEGTLYVGF VTSNQPAPNR NKFLSKVLNK GDVFVFPAGL IHFQFNPNPH KPAVAIAALS SQNPRAITIA NAVFGSDPQI
201: SDDVLAKAFQ VEKNTIDRLQ AQFWENNHN
101: YAPLGQNPPH THPRATEILT VLEGTLYVGF VTSNQPAPNR NKFLSKVLNK GDVFVFPAGL IHFQFNPNPH KPAVAIAALS SQNPRAITIA NAVFGSDPQI
201: SDDVLAKAFQ VEKNTIDRLQ AQFWENNHN
001: MEGFLRFLVA KAILLALASS FVSCYDPSPL QDFCVAVDDA SGVFVNGKFC KDPKYVKAED FFTSGLNIAG NTINRVGSNV TNVNVDKIPG LNTLGVSLVR
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY
101: IDFAPGGQNP PHTHPRATEI LVVVEGTLLV GFVTSNQDNN RLFSKVLYPG DVFVFPIGMI HFQVNVGRTN AVAFAGLGSQ NPGTITIADA VFGSKPSIMP
201: EILAKAFQLD VNVVKYLEAR FSSNYDRHY
Arabidopsis Description
Germin-like protein subfamily 1 member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFF9]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.