Factsheet for TraesCSU01G137500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G566700.1	Wheat	extracellular	61.73	80.28
TraesCS2B01G616500.1	Wheat	extracellular	61.73	78.8
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	55.6	69.68
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	55.6	68.75
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	54.51	68.02
HORVU2Hr1G127660.1	Barley	cytosol	49.1	63.55
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	45.49	57.8
KRH47602	Soybean	extracellular, vacuole	32.49	43.27
KRH47606	Soybean	extracellular, vacuole	32.49	43.27
KRH47605	Soybean	extracellular	15.52	40.19
KRH06188	Soybean	extracellular	25.99	39.78
KRH47601	Soybean	endoplasmic reticulum	29.6	39.42
KRH47603	Soybean	extracellular, vacuole	31.77	39.11
Os04t0288100-00	Rice	mitochondrion	31.41	35.08
KRH07140	Soybean	extracellular, vacuole	26.35	34.76
KRH06189	Soybean	endoplasmic reticulum, extracellular, vacuole	25.63	34.47
TraesCSU01G088800.1	Wheat	cytosol	14.8	33.61
KRH07144	Soybean	extracellular, vacuole	25.63	33.33
KRH07141	Soybean	cytosol	23.1	31.68
TraesCSU01G057500.1	Wheat	extracellular	25.63	31.56
TraesCSU01G057600.1	Wheat	extracellular	22.74	29.44
TraesCSU01G172100.1	Wheat	extracellular	24.19	29.26

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF49	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G137500	EnsemblPlants:TraesCSU01G137500.1	SEG:seg

Description

No Description!

Coordinates

chrUn:-:124881633..124882466

Molecular Weight (calculated)

29907.2 Da

IEP (calculated)

8.345

GRAVY (calculated)

0.187

Length

277 amino acids

Sequence
(BLAST)

001: MAKIVLLLSL LLLFWCVAQA QLAKEFCVAD LGSSDTPAGY PCKPQAAVTA DDFYYRGLGT TGPTVNPFKI SLSSAFVTSF PGVNGLGISA ARVDFAVGGV
101: VPLHWHPAAT ELIFVVEGTL SCGFISATSN NRVYTNTLYK GDMMVLPQGQ PHFQYNLGNT TAVQQPQPRR ADPRLCALRQ QPPVGGAHQG HPPRRLAGQE
201: AQGALRRHRM SLSSSPSLAS PPPGLNLNLN WSCSCFSGLI YFIILSSFKI FCYLYACMYV CGVKFSEFLC SSGLEEI

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.