Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G023590.1 | Barley | extracellular, vacuole | 98.66 | 100.0 |
| HORVU2Hr1G127670.1 | Barley | extracellular, vacuole | 87.5 | 88.29 |
| TraesCS2B01G616500.1 | Wheat | extracellular | 84.82 | 87.56 |
| TraesCS2D01G566700.1 | Wheat | extracellular | 80.36 | 84.51 |
| HORVU2Hr1G127660.1 | Barley | cytosol | 78.57 | 82.24 |
| EES15104 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 69.64 | 71.56 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 56.25 | 59.43 |
| TraesCSU01G137500.1 | Wheat | extracellular, plasma membrane, vacuole | 68.75 | 55.6 |
| KRH47606 | Soybean | extracellular, vacuole | 48.66 | 52.4 |
| KRH47602 | Soybean | extracellular, vacuole | 48.66 | 52.4 |
| KRH06188 | Soybean | extracellular | 40.18 | 49.72 |
| KRH47601 | Soybean | endoplasmic reticulum | 44.2 | 47.6 |
| KRH47603 | Soybean | extracellular, vacuole | 47.77 | 47.56 |
| Os04t0288100-00 | Rice | mitochondrion | 49.11 | 44.35 |
| KRH07140 | Soybean | extracellular, vacuole | 40.62 | 43.33 |
| KRH06189 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.73 | 43.2 |
| KRH07144 | Soybean | extracellular, vacuole | 38.84 | 40.85 |
| HORVU6Hr1G089510.1 | Barley | extracellular | 38.39 | 39.81 |
| KRH47605 | Soybean | extracellular | 18.75 | 39.25 |
| HORVU3Hr1G107830.1 | Barley | extracellular | 39.29 | 39.11 |
| KRH07141 | Soybean | cytosol | 35.27 | 39.11 |
| HORVU6Hr1G089450.1 | Barley | extracellular | 37.5 | 38.89 |
| HORVU3Hr1G107860.1 | Barley | extracellular | 38.84 | 38.67 |
| HORVU3Hr1G107930.1 | Barley | extracellular | 37.5 | 37.33 |
| HORVU6Hr1G089570.3 | Barley | extracellular, vacuole | 36.61 | 37.1 |
| HORVU3Hr1G107870.1 | Barley | extracellular | 33.48 | 33.94 |
| HORVU3Hr1G107910.2 | Barley | mitochondrion, vacuole | 35.71 | 32.26 |
| HORVU4Hr1G005540.1 | Barley | extracellular | 32.59 | 31.74 |
| HORVU4Hr1G005380.1 | Barley | extracellular | 31.25 | 31.25 |
| HORVU6Hr1G005420.1 | Barley | extracellular | 31.7 | 31.14 |
| HORVU4Hr1G005440.3 | Barley | extracellular | 30.8 | 29.36 |
| HORVU3Hr1G066330.1 | Barley | extracellular, mitochondrion, vacuole | 34.38 | 29.17 |
| HORVU5Hr1G109190.1 | Barley | extracellular, mitochondrion, vacuole | 35.71 | 27.49 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 32.14 | 27.27 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 27.68 | 26.38 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 35.27 | 23.58 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | UniProt:A0A287UH25 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | InterPro:Germin |
| InterPro:Germin_Mn-BS | EnsemblPlantsGene:HORVU6Hr1G066380 | EnsemblPlants:HORVU6Hr1G066380.1 | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF35 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B4627A0 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr6H:-:459495685..459496522
Molecular Weight (calculated)
23928.9 Da
IEP (calculated)
7.978
GRAVY (calculated)
0.282
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: YKHVHFKLNS MAKAVLLLSL SLLLLPFACP AQLAKEFCVA DLASSDTPAG YPCKPQAAVT ADDFYYRGLG TTGPAINPFK ISLSSAFVTN FPGVNGLGIS
101: AARVDFAVGG VVPLHWHPAA TELIFVLEGT LSCGFISATS NRVYTKTLYK GDLMVLPQGQ QHFQYNLGNT TAAALSTYSS HNPVVQTLDF ALFANNLPSE
201: VVNKVTLLDE LEVRKLKALF GGTG
101: AARVDFAVGG VVPLHWHPAA TELIFVLEGT LSCGFISATS NRVYTKTLYK GDLMVLPQGQ QHFQYNLGNT TAAALSTYSS HNPVVQTLDF ALFANNLPSE
201: VVNKVTLLDE LEVRKLKALF GGTG
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.