Factsheet for HORVU3Hr1G066330.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, vacuole

Predictor Summary:

mitochondrion 2
vacuole 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, vacuole
Any Predictor:	mitochondrion, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G254200.1	Wheat	extracellular	79.55	94.59
TraesCS3A01G253300.1	Wheat	extracellular	79.17	94.14
TraesCS3B01G285200.1	Wheat	extracellular	78.79	93.69
Os01t0705100-00	Rice	extracellular	65.91	77.68
EES01342	Sorghum	extracellular, vacuole	61.36	73.3
Zm00001d043710_P001	Maize	extracellular, vacuole	60.23	72.27
GSMUA_Achr4P17250_001	Banana	extracellular	32.58	47.51
GSMUA_AchrUn_...	Banana	extracellular	28.41	46.88
HORVU6Hr1G089510.1	Barley	extracellular	36.74	44.91
HORVU3Hr1G107830.1	Barley	extracellular	38.26	44.89
HORVU3Hr1G107860.1	Barley	extracellular	37.88	44.44
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	35.98	42.99
HORVU4Hr1G005380.1	Barley	extracellular	36.36	42.86
HORVU6Hr1G089450.1	Barley	extracellular	34.85	42.59
HORVU3Hr1G107930.1	Barley	extracellular	35.98	42.22
HORVU4Hr1G005540.1	Barley	extracellular	35.23	40.43
HORVU3Hr1G107870.1	Barley	extracellular	33.33	39.82
HORVU4Hr1G005440.3	Barley	extracellular	35.23	39.57
HORVU7Hr1G036720.1	Barley	extracellular	29.92	37.26
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	33.71	35.89
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	39.39	35.74
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	29.17	34.84
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	29.17	34.38
HORVU6Hr1G005420.1	Barley	extracellular	29.55	34.21
HORVU3Hr1G034100.2	Barley	cytosol, plastid	34.09	34.09
HORVU4Hr1G076480.3	Barley	vacuole	30.3	34.04
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	28.41	33.78
HORVU2Hr1G127660.1	Barley	cytosol	26.52	32.71
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	38.64	30.45

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A287LF99	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0016020	GO:GO:0016021	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	EnsemblPlantsGene:HORVU3Hr1G066330	EnsemblPlants:HORVU3Hr1G066330.1	InterPro:IPR014710
PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF34	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	TMHMM:TMhelix	UniParc:UPI000B47D51F	:

Description

No Description!

Coordinates

chrchr3H:+:504749358..504750316

Molecular Weight (calculated)

28347.3 Da

IEP (calculated)

8.486

GRAVY (calculated)

0.056

Length

264 amino acids

Sequence
(BLAST)

001: RAARQCHRQE HVAIPRNQTP GREATRVGYV PRIDRYTYAG RLMASARSVM LQVLLLAATF AAVPGVLSDP PPLQDFCVAD LKAATTVDGF PCKATSTVVD
101: DDFFSDAMVA APRTDTNPFG VNSTRATVSA FPGLNTLGLS ITRTDLAPGG LNPPHSHPRG SELVLVLKGE VMVGFTSATN RLFTKVVKEN ELYVVPRGLQ
201: HFQLNVGTGD AVFMAMFDAQ SPGLVTPTLA LFATEPAMPM EVLTKTFLMG KDDVTAMKSK FAGF

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.