Factsheet for TraesCS3A01G253300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G285200.1	Wheat	extracellular	98.2	98.2
TraesCS3D01G254200.1	Wheat	extracellular	97.3	97.3
TraesCS2A01G109200.1	Wheat	extracellular	90.09	90.5
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	94.14	79.17
Os01t0705100-00	Rice	extracellular	77.93	77.23
EES01342	Sorghum	extracellular, vacuole	72.52	72.85
Zm00001d043710_P001	Maize	extracellular, vacuole	71.17	71.82
GSMUA_Achr4P17250_001	Banana	extracellular	38.74	47.51
GSMUA_AchrUn_...	Banana	extracellular	34.23	47.5
TraesCS6A01G382200.1	Wheat	extracellular	44.59	45.83
TraesCS6A01G382000.1	Wheat	cytosol	24.32	44.26
TraesCS6A01G383000.1	Wheat	extracellular	42.79	43.98
TraesCS6A01G382900.1	Wheat	extracellular	42.79	43.98
TraesCS3A01G165500.1	Wheat	extracellular	42.79	43.18
TraesCS3A01G040900.1	Wheat	extracellular	43.69	43.11
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	41.89	43.06
TraesCS5A01G453200.1	Wheat	extracellular	43.24	41.74
TraesCS4A01G279200.1	Wheat	extracellular	41.44	41.07
TraesCS1A01G080000.1	Wheat	extracellular	41.44	41.07
TraesCS4A01G181900.1	Wheat	extracellular	40.99	40.81
TraesCS4A01G279300.1	Wheat	extracellular	40.99	40.81
TraesCS4A01G181700.1	Wheat	extracellular	40.99	40.62
TraesCS4A01G279100.1	Wheat	extracellular	40.54	40.54
TraesCS4A01G278900.1	Wheat	extracellular, unclear	41.44	40.53
TraesCS2A01G211800.1	Wheat	extracellular	40.99	40.09
TraesCS7A01G178300.1	Wheat	extracellular	36.94	38.68
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	36.49	38.39
TraesCS2A01G075000.1	Wheat	extracellular	36.04	37.56
TraesCS4A01G181800.1	Wheat	extracellular	29.28	37.36
TraesCS4A01G181600.1	Wheat	mitochondrion	27.93	35.23
TraesCS6A01G028700.1	Wheat	extracellular, unclear	35.14	34.21

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF34	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G253300	EnsemblPlants:TraesCS3A01G253300.1	SEG:seg

Description

No Description!

Coordinates

chr3A:-:474678635..474679303

Molecular Weight (calculated)

23460.4 Da

IEP (calculated)

4.780

GRAVY (calculated)

0.295

Length

222 amino acids

Sequence
(BLAST)

001: MASARSVMLH VLLLALALAA APAVLSDPPP LQDFCVADLK AATAVDGFPC KAPSTVEDDD FFSDAMVAAP RTDTNPFGVN STRATVSVFP GLNTLGLSIT
101: RTDLAVGGLN PPHSHPRGSE LVLVLKGEVM VGFTSATNRL FTKVVKENEL YVVPRGLQHY QLNVGTGDAV FMAMFDAQSP GLVTPTLALF ATEPAMPMEV
201: LTKTFLMGED DVTAMKSKFA GF

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.