Factsheet for TraesCS2A01G109200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G109300.1	Wheat	vacuole	95.48	94.62
TraesCS3A01G253300.1	Wheat	extracellular	90.5	90.09
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	78.73	85.71
Os01t0705100-00	Rice	extracellular	78.73	77.68
EES01342	Sorghum	extracellular, vacuole	74.66	74.66
Zm00001d043710_P001	Maize	extracellular, vacuole	72.85	73.18
GSMUA_Achr4P17250_001	Banana	extracellular	39.82	48.62
GSMUA_AchrUn_...	Banana	extracellular	34.39	47.5
TraesCS6A01G382200.1	Wheat	extracellular	44.34	45.37
TraesCS6A01G382000.1	Wheat	cytosol	24.43	44.26
TraesCS5A01G453200.1	Wheat	extracellular	45.7	43.91
TraesCS4A01G279200.1	Wheat	extracellular	44.34	43.75
TraesCS4A01G181700.1	Wheat	extracellular	43.89	43.3
TraesCS4A01G279100.1	Wheat	extracellular	43.44	43.24
TraesCS3A01G165500.1	Wheat	extracellular	42.99	43.18
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	42.08	43.06
TraesCS4A01G279300.1	Wheat	extracellular	43.44	43.05
TraesCS1A01G080000.1	Wheat	extracellular	43.44	42.86
TraesCS4A01G181900.1	Wheat	extracellular	42.99	42.6
TraesCS4A01G278900.1	Wheat	extracellular, unclear	43.44	42.29
TraesCS3A01G040900.1	Wheat	extracellular	42.99	42.22
TraesCS6A01G382900.1	Wheat	extracellular	41.18	42.13
TraesCS6A01G383000.1	Wheat	extracellular	41.18	42.13
TraesCS2A01G211800.1	Wheat	extracellular	42.99	41.85
TraesCS4A01G181800.1	Wheat	extracellular	31.67	40.23
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	36.2	37.91
TraesCS7A01G178300.1	Wheat	extracellular	36.2	37.74
TraesCS4A01G181600.1	Wheat	mitochondrion	29.86	37.5
TraesCS2A01G075000.1	Wheat	extracellular	35.29	36.62
TraesCS6A01G028700.1	Wheat	extracellular, unclear	34.84	33.77

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF34	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G109200	EnsemblPlants:TraesCS2A01G109200.1	SEG:seg

Description

No Description!

Coordinates

chr2A:-:61295311..61295976

Molecular Weight (calculated)

22960.8 Da

IEP (calculated)

6.253

GRAVY (calculated)

0.284

Length

221 amino acids

Sequence
(BLAST)

001: MASASSVVLL LIAAALTAAA PGVLSDPPPL QDFCVADLKA ATAVDGFPCK AASTVADDDF FSDAMVAAPR TDTNPFGVNS TRATVSAFPG LNTLGLSITR
101: TDLAPGGLNP PHSHPRGSEL VLVLKGEVMV GFTSAANRLY SKVVKKNELY VVPRGLQHFQ LNVGKGDAVF MAMFDAQSPG LVTPTLGLFA TKPAMPMEVL
201: TKTFLAGEDE VSAMKSKFAG F

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.