Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29220 | Canola | nucleus | 90.59 | 99.35 |
| Bra024478.1-P | Field mustard | nucleus | 90.0 | 98.71 |
| CDY46312 | Canola | nucleus | 90.0 | 91.07 |
| CDY30327 | Canola | nucleus, plastid | 88.82 | 89.88 |
| CDY53277 | Canola | nucleus, plastid | 88.24 | 89.29 |
| AT2G18160.1 | Thale cress | nucleus | 85.29 | 84.8 |
| VIT_04s0023g02430.t01 | Wine grape | nucleus | 45.29 | 49.04 |
| Solyc03g033730.1.1 | Tomato | nucleus | 32.94 | 48.7 |
| Solyc02g084860.1.1 | Tomato | nucleus | 41.18 | 48.61 |
| PGSC0003DMT400009068 | Potato | nucleus | 41.18 | 48.61 |
| CDX76292 | Canola | nucleus | 40.59 | 48.59 |
| CDX75445 | Canola | nucleus | 43.53 | 48.05 |
| CDY17470 | Canola | nucleus | 40.0 | 47.89 |
| CDY31528 | Canola | nucleus | 40.0 | 47.89 |
| CDX69072 | Canola | nucleus | 42.94 | 47.4 |
| CDX72490 | Canola | nucleus | 41.76 | 46.41 |
| CDY45319 | Canola | nucleus | 41.76 | 46.41 |
| PGSC0003DMT400040054 | Potato | nucleus | 35.29 | 45.45 |
| CDY39029 | Canola | nucleus | 41.76 | 44.94 |
| CDY52079 | Canola | nucleus | 41.18 | 44.3 |
| KRH58937 | Soybean | nucleus, plastid | 42.35 | 44.17 |
| CDX76636 | Canola | nucleus | 35.88 | 43.26 |
| CDY11421 | Canola | nucleus | 35.29 | 42.55 |
| CDX67893 | Canola | nucleus | 33.53 | 42.54 |
| CDY25111 | Canola | nucleus | 33.53 | 42.54 |
| CDX85891 | Canola | nucleus | 43.53 | 42.05 |
| PGSC0003DMT400058187 | Potato | nucleus | 40.59 | 41.57 |
| CDX68131 | Canola | nucleus | 42.35 | 40.22 |
| Os09t0306400-01 | Rice | nucleus | 34.71 | 38.56 |
| EER96530 | Sorghum | nucleus | 35.88 | 38.36 |
| HORVU5Hr1G054510.1 | Barley | nucleus | 31.76 | 35.06 |
| TraesCS5A01G179000.1 | Wheat | nucleus | 31.76 | 35.06 |
| TraesCS5D01G183500.1 | Wheat | nucleus | 31.76 | 35.06 |
| TraesCS5B01G176700.1 | Wheat | nucleus | 31.18 | 34.64 |
| KRH42848 | Soybean | nucleus | 42.35 | 34.62 |
| Zm00001d005578_P001 | Maize | nucleus | 34.12 | 34.12 |
| Zm00001d030577_P001 | Maize | nucleus | 29.41 | 31.65 |
| EES14897 | Sorghum | nucleus, plastid | 31.18 | 30.11 |
| Os08t0357300-01 | Rice | cytosol | 17.06 | 25.66 |
| Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 15.88 | 22.31 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078G656 | UniProt:A0A078G656 | EnsemblPlants:CDY20909 | ProteinID:CDY20909 |
| ProteinID:CDY20909.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00013267001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF229 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EEFD26 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaC06g01290DBnaC06g01290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G656]
Coordinates
chrLK032114:-:276880..277607
Molecular Weight (calculated)
18634.8 Da
IEP (calculated)
5.214
GRAVY (calculated)
-0.549
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSTYRS SSSSDGGNPN AVAVDERKRK RMLSNRESAR RSRMRKQKHI DDLTAQINQL SSDNRQILTS LTVTSQLYMK IQAENSILTA QMAELSSRLE
101: SLNEIVDLVT TTNGAGFGGG VDMIDGCGFD DRTVGINSDG FYDDMMSGVN HWGGSVYSNQ PIMANDINMY
101: SLNEIVDLVT TTNGAGFGGG VDMIDGCGFD DRTVGINSDG FYDDMMSGVN HWGGSVYSNQ PIMANDINMY
001: MASSSSTYRS SSSSDGGNNN PSDSVVTVDE RKRKRMLSNR ESARRSRMRK QKHVDDLTAQ INQLSNDNRQ ILNSLTVTSQ LYMKIQAENS VLTAQMEELS
101: TRLQSLNEIV DLVQSNGAGF GVDQIDGCGF DDRTVGIDGY YDDMNMMSNV NHWGGSVYTN QPIMANDINM Y
101: TRLQSLNEIV DLVQSNGAGF GVDQIDGCGF DDRTVGIDGY YDDMNMMSNV NHWGGSVYTN QPIMANDINM Y
Arabidopsis Description
BZIP2bZIP transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.