Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009793.1-P | Field mustard | nucleus | 95.32 | 91.07 |
| CDX80469 | Canola | nucleus | 89.21 | 89.21 |
| AT5G24800.1 | Thale cress | nucleus | 79.86 | 80.14 |
| CDY05458 | Canola | nucleus | 73.74 | 73.74 |
| CDY05397 | Canola | nucleus | 73.02 | 73.02 |
| KRH52637 | Soybean | nucleus | 36.69 | 35.42 |
| KRH16196 | Soybean | cytosol, nucleus | 19.06 | 35.1 |
| KRH61976 | Soybean | nucleus | 37.77 | 35.0 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 30.94 | 34.26 |
| Zm00001d050588_P002 | Maize | nucleus | 27.7 | 33.92 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 42.45 | 33.81 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 29.86 | 33.47 |
| Zm00001d003529_P001 | Maize | cytosol | 15.47 | 33.33 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 28.78 | 32.39 |
| TraesCS7A01G488600.2 | Wheat | nucleus | 28.78 | 31.87 |
| Zm00001d046937_P001 | Maize | nucleus | 30.94 | 30.5 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 30.22 | 30.32 |
| Os02t0266800-01 | Rice | nucleus | 32.01 | 29.87 |
| Os06t0662200-01 | Rice | nucleus | 31.3 | 29.49 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 32.73 | 29.07 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 32.73 | 28.98 |
| KXG29589 | Sorghum | nucleus | 33.09 | 28.75 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 32.01 | 28.43 |
| EER90165 | Sorghum | nucleus | 29.14 | 28.22 |
| Zm00001d015421_P001 | Maize | nucleus | 33.45 | 28.1 |
| PGSC0003DMT400038493 | Potato | nucleus | 34.17 | 27.22 |
| Solyc08g006110.2.1 | Tomato | nucleus | 33.45 | 26.5 |
| KRH04810 | Soybean | nucleus | 30.22 | 26.33 |
| CDY05606 | Canola | nucleus | 29.5 | 25.71 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 31.3 | 25.22 |
| CDY48665 | Canola | nucleus | 28.42 | 24.84 |
| CDX86210 | Canola | nucleus | 28.06 | 24.84 |
| CDY33887 | Canola | nucleus | 27.7 | 24.44 |
| CDY14423 | Canola | nucleus | 30.94 | 23.12 |
| CDY55832 | Canola | nucleus | 25.9 | 22.86 |
| CDY07692 | Canola | nucleus | 30.58 | 22.79 |
| CDX73466 | Canola | nucleus | 28.06 | 20.63 |
| CDX78251 | Canola | nucleus | 26.62 | 19.27 |
| CDY22069 | Canola | nucleus | 25.54 | 17.97 |
| CDY21903 | Canola | nucleus | 25.18 | 17.77 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 16.19 | 15.68 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | GO:A0A078DGQ6 | InterPro:Basic_leucine-zipper_C | EnsemblPlants:CDX88132 |
| ProteinID:CDX88132 | ProteinID:CDX88132.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00147572001 |
| InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF113 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF4900 | InterPro:bZIP | SEG:seg |
Description
BnaA06g27230D
Coordinates
chrLK031854:+:837915..839185
Molecular Weight (calculated)
30653.7 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.685
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGHTAKDTG MKRSASELAL QEYLTRVIPL EPSFDLKNQD HTGELRDRHL LSETLIPAGV LLDAQSSICE NLSADSPVSA NKPEVRRRAR RTTSVSSHGH
101: SDEEDAETEA GQAEMTNDPN HLKRMRRMYS NRESARRSRR RKQEHLADLE SQVDSLKGEN TTLYKQLIDA TQLFRSAGTN NRILKSDVET LRIKVKLAED
201: LVARGSFTSS LNQLLQTHLS PSPQSINSLH YTGSTSPAVT VHSDQSMFPG ITLSGQNSSS GLGNVSSEAV SCVSDIWP
101: SDEEDAETEA GQAEMTNDPN HLKRMRRMYS NRESARRSRR RKQEHLADLE SQVDSLKGEN TTLYKQLIDA TQLFRSAGTN NRILKSDVET LRIKVKLAED
201: LVARGSFTSS LNQLLQTHLS PSPQSINSLH YTGSTSPAVT VHSDQSMFPG ITLSGQNSSS GLGNVSSEAV SCVSDIWP
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.