Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY39029 | Canola | nucleus | 93.67 | 93.67 |
Bra008192.1-P | Field mustard | nucleus | 93.67 | 89.7 |
AT1G75390.1 | Thale cress | nucleus | 75.32 | 68.79 |
CDX85891 | Canola | nucleus | 73.42 | 65.91 |
CDX68131 | Canola | nucleus | 72.78 | 64.25 |
CDY31528 | Canola | nucleus | 43.04 | 47.89 |
CDY17470 | Canola | nucleus | 43.04 | 47.89 |
CDX76292 | Canola | nucleus | 43.04 | 47.89 |
CDX75445 | Canola | nucleus | 46.2 | 47.4 |
CDX72490 | Canola | nucleus | 45.57 | 47.06 |
CDY45319 | Canola | nucleus | 45.57 | 47.06 |
CDX69072 | Canola | nucleus | 45.57 | 46.75 |
CDY29220 | Canola | nucleus | 44.3 | 45.16 |
CDX76636 | Canola | nucleus | 37.97 | 42.55 |
CDY53277 | Canola | nucleus, plastid | 44.94 | 42.26 |
CDY30327 | Canola | nucleus, plastid | 44.94 | 42.26 |
CDY11421 | Canola | nucleus | 37.34 | 41.84 |
CDY20909 | Canola | nucleus | 44.3 | 41.18 |
CDY46312 | Canola | nucleus | 43.67 | 41.07 |
CDX67893 | Canola | nucleus | 34.81 | 41.04 |
CDY25111 | Canola | nucleus | 34.81 | 41.04 |
EER96530 | Sorghum | nucleus | 33.54 | 33.33 |
Os09t0306400-01 | Rice | nucleus | 32.28 | 33.33 |
HORVU5Hr1G054510.1 | Barley | nucleus | 29.75 | 30.52 |
TraesCS5B01G176700.1 | Wheat | nucleus | 29.11 | 30.07 |
TraesCS5A01G179000.1 | Wheat | nucleus | 29.11 | 29.87 |
TraesCS5D01G183500.1 | Wheat | nucleus | 29.11 | 29.87 |
Zm00001d005578_P001 | Maize | nucleus | 31.65 | 29.41 |
Zm00001d030577_P001 | Maize | nucleus | 27.22 | 27.22 |
EES14897 | Sorghum | nucleus, plastid | 29.75 | 26.7 |
Os08t0357300-01 | Rice | cytosol | 13.92 | 19.47 |
Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 12.03 | 15.7 |
Protein Annotations
Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078IRL8 | UniProt:A0A078IRL8 | EnsemblPlants:CDY52079 | ProteinID:CDY52079 |
ProteinID:CDY52079.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00004817001 | InterPro:IPR004827 | PFAM:PF00170 |
ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF229 | SMART:SM00338 | SUPFAM:SSF57959 |
UniParc:UPI0004EE2810 | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaCnng21800DBnaCnng21800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRL8]
Coordinates
chrLK033054:-:35469..36081
Molecular Weight (calculated)
17475.5 Da
IEP (calculated)
6.257
GRAVY (calculated)
-0.526
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKTEMGSPA SGNCSSGLQN YGSESDERKR KRKESNRESA RRSRMRKQKH LDDLTAQIAH FLEENSHIVA GISVTTQQYV TIEGENSVLR AQFLELNQRL
101: NSLNEIVEIA GGFWMETGQG GGVIGFYDGV MNPLNLGFYN QTLMASASTV SADVFNCC
101: NSLNEIVEIA GGFWMETGQG GGVIGFYDGV MNPLNLGFYN QTLMASASTV SADVFNCC
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.