Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78251 | Canola | nucleus | 89.95 | 88.54 |
| Bra007083.1-P | Field mustard | nucleus | 88.62 | 87.24 |
| CDY55832 | Canola | nucleus | 45.77 | 54.92 |
| CDY07692 | Canola | nucleus | 46.03 | 46.65 |
| CDY14423 | Canola | nucleus | 41.01 | 41.67 |
| GSMUA_Achr10P... | Banana | nucleus | 21.69 | 36.94 |
| CDY48665 | Canola | nucleus | 30.69 | 36.48 |
| CDX86210 | Canola | nucleus | 30.16 | 36.31 |
| GSMUA_Achr7P07650_001 | Banana | nucleus | 20.9 | 34.8 |
| CDY33887 | Canola | nucleus | 28.57 | 34.29 |
| CDY05606 | Canola | nucleus | 28.31 | 33.54 |
| CDY21903 | Canola | nucleus | 34.92 | 33.5 |
| Zm00001d034455_P001 | Maize | nucleus | 24.87 | 33.45 |
| Zm00001d034447_P001 | Maize | nucleus | 23.28 | 32.47 |
| TraesCS5D01G068800.1 | Wheat | nucleus | 24.87 | 31.54 |
| EER90738 | Sorghum | nucleus | 33.6 | 31.36 |
| CDY22069 | Canola | nucleus | 32.54 | 31.14 |
| Zm00001d034457_P003 | Maize | nucleus | 33.6 | 31.05 |
| TraesCS5A01G057500.2 | Wheat | nucleus | 24.34 | 30.87 |
| TraesCS5B01G059200.1 | Wheat | nucleus | 24.07 | 30.54 |
| Os03t0796900-01 | Rice | nucleus | 34.13 | 30.35 |
| GSMUA_Achr4P28530_001 | Banana | nucleus | 33.86 | 30.19 |
| TraesCS5A01G440400.1 | Wheat | nucleus | 31.22 | 30.1 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 32.01 | 29.8 |
| TraesCS5B01G444100.2 | Wheat | nucleus | 30.95 | 29.25 |
| GSMUA_Achr2P12610_001 | Banana | nucleus | 31.22 | 28.64 |
| CDX80469 | Canola | nucleus | 20.9 | 28.42 |
| Zm00001d013074_P003 | Maize | cytosol | 32.54 | 28.08 |
| CDX88132 | Canola | nucleus | 20.63 | 28.06 |
| HORVU5Hr1G014170.10 | Barley | nucleus, plastid | 27.25 | 27.76 |
| EES16316 | Sorghum | nucleus | 23.02 | 27.44 |
| CDY05397 | Canola | nucleus | 20.11 | 27.34 |
| CDY05458 | Canola | nucleus | 19.84 | 26.98 |
| Os07t0182000-01 | Rice | nucleus | 30.42 | 26.38 |
| Zm00001d030995_P002 | Maize | nucleus | 21.43 | 26.13 |
| Os12t0601800-01 | Rice | nucleus | 18.25 | 25.84 |
| HORVU5Hr1G106120.3 | Barley | nucleus | 31.75 | 25.16 |
| KXG34539 | Sorghum | nucleus | 25.93 | 24.26 |
| Zm00001d018971_P003 | Maize | nucleus | 26.72 | 22.15 |
| TraesCS1D01G332200.1 | Wheat | nucleus | 23.28 | 21.84 |
| TraesCS1B01G343500.1 | Wheat | nucleus | 23.02 | 21.27 |
| EER95953 | Sorghum | nucleus | 24.87 | 21.12 |
| TraesCS1A01G329900.1 | Wheat | nucleus | 18.78 | 19.4 |
| HORVU1Hr1G077530.1 | Barley | nucleus | 20.37 | 18.83 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | GO:A0A078C8R7 | InterPro:Basic_leucine-zipper_C | EnsemblPlants:CDX73466 |
| ProteinID:CDX73466 | ProteinID:CDX73466.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00108975001 |
| InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF240 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EF076C | InterPro:bZIP | SEG:seg |
Description
BnaC08g25370D
Coordinates
chrLK031799:+:573782..576053
Molecular Weight (calculated)
41499.2 Da
IEP (calculated)
5.747
GRAVY (calculated)
-0.859
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIVFSVDDL TESFWPPPPP EPSPGSVSAQ NMPDGMTRSQ SEWAFQRLLR EMSGSDESPT TINVRSPPPV QSEQSLSTVD ETSDVVEIQK PPPPDDQGNR
101: DRARSSSDPL DSDVVDPNQY HAILKSKLEI ACAAVARRVG AVKPEDSSAS GVNQKLSPPA GSQAQGSVVV AQTSPGASSV RSVPSTSVKK KPDVVPARQT
201: TSISSRDDSD DDDLDGDMET ADNGDPTDVK RARRMLSNRE SARRSRRRKQ EQMNEFDTQV NQLRAEHSTL LGRLGDMNQK FDAAAVDNRI LRADIETLRT
301: KVKMAEETVK RVTGVNPLQW ARPNMGMPVN NTPRISSTTG ASLAPNQRVE VNSEGLQNQF ATNPKNMYET MPHWNHKH
101: DRARSSSDPL DSDVVDPNQY HAILKSKLEI ACAAVARRVG AVKPEDSSAS GVNQKLSPPA GSQAQGSVVV AQTSPGASSV RSVPSTSVKK KPDVVPARQT
201: TSISSRDDSD DDDLDGDMET ADNGDPTDVK RARRMLSNRE SARRSRRRKQ EQMNEFDTQV NQLRAEHSTL LGRLGDMNQK FDAAAVDNRI LRADIETLRT
301: KVKMAEETVK RVTGVNPLQW ARPNMGMPVN NTPRISSTTG ASLAPNQRVE VNSEGLQNQF ATNPKNMYET MPHWNHKH
001: MHIVFSVDDL TESFWPVPAP APSPGSSSTP SPTQNVADGM TRSQSEWAFH RLINELSGSD SSPTTNTIER SPPPVQSLSR LEETVDETED VVEIQKPQNH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
101: RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV
201: PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR
301: TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN
401: HKH
Arabidopsis Description
BZIP25Basic leucine zipper 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1G6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.