Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G440400.1 | Wheat | nucleus | 93.84 | 97.19 |
| TraesCS5B01G444100.2 | Wheat | nucleus | 87.93 | 89.25 |
| HORVU5Hr1G106120.3 | Barley | nucleus | 86.7 | 73.79 |
| EER90738 | Sorghum | nucleus | 67.98 | 68.15 |
| Zm00001d034447_P001 | Maize | nucleus | 45.32 | 67.9 |
| Zm00001d034457_P003 | Maize | nucleus | 66.75 | 66.26 |
| Os03t0796900-01 | Rice | nucleus | 66.01 | 63.06 |
| Zm00001d034455_P001 | Maize | nucleus | 42.86 | 61.92 |
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 20.2 | 58.16 |
| Zm00001d013074_P003 | Maize | cytosol | 61.08 | 56.62 |
| CDY05606 | Canola | nucleus | 31.28 | 39.81 |
| Bra020620.1-P | Field mustard | nucleus | 30.79 | 39.68 |
| Bra010010.1-P | Field mustard | nucleus | 30.3 | 39.17 |
| CDY33887 | Canola | nucleus | 30.3 | 39.05 |
| CDX86210 | Canola | nucleus | 30.05 | 38.85 |
| CDY48665 | Canola | nucleus | 30.3 | 38.68 |
| AT5G28770.2 | Thale cress | nucleus | 29.56 | 38.22 |
| Solyc01g097330.2.1 | Tomato | nucleus | 39.41 | 35.24 |
| PGSC0003DMT400050096 | Potato | nucleus | 37.93 | 34.15 |
| KRG89569 | Soybean | nucleus | 17.24 | 32.56 |
| TraesCS5D01G068800.1 | Wheat | nucleus | 23.89 | 32.55 |
| CDX73466 | Canola | nucleus | 29.8 | 32.01 |
| CDX78251 | Canola | nucleus | 30.05 | 31.77 |
| Bra000102.1-P | Field mustard | nucleus | 28.57 | 31.69 |
| Bra007083.1-P | Field mustard | nucleus | 29.8 | 31.51 |
| CDY07692 | Canola | nucleus | 28.57 | 31.1 |
| TraesCS1D01G332200.1 | Wheat | nucleus | 30.3 | 30.52 |
| CDY14423 | Canola | nucleus | 27.83 | 30.38 |
| CDY55832 | Canola | nucleus | 23.15 | 29.84 |
| AT3G54620.1 | Thale cress | nucleus | 29.31 | 29.53 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 17.49 | 28.74 |
| CDY21903 | Canola | nucleus | 27.09 | 27.92 |
| AT4G02640.2 | Thale cress | nucleus | 28.33 | 27.58 |
| Bra036251.1-P | Field mustard | nucleus | 25.86 | 26.65 |
| CDY22069 | Canola | nucleus | 25.62 | 26.33 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 19.46 | 25.24 |
| VIT_00s1609g00010.t01 | Wine grape | cytosol | 5.17 | 14.58 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF90 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5D01G447500 | EnsemblPlants:TraesCS5D01G447500.1 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:497783481..497787429
Molecular Weight (calculated)
42385.3 Da
IEP (calculated)
4.895
GRAVY (calculated)
-0.488
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MERVFSVEEI PDPFWGQPSP RPAGASAAGP ASSGGGGAEG AMNRCPSEWY FQKFLEEAVL DSPAADPGPM AGASGGGVGA AEVKRTAAAV APAPAATGAV
101: VDPVEYNAML KQKLEKDLAA VAMWRASGAM PPERFAASPS LPNADVQHIG TINPIGGNVV PVQNKLAGGA SGVSGPHLVQ NADALVKQAA SSSSREQSED
201: DDMEGEDEIT GNGPPTDQRL RRRKQSNRES ARRSRSRKAA HLNELEAQVS QLRVENSSLL RRLADVNQKY NGAAVDNRVL KADVETLRAK VKMAEDSVKR
301: VTGMSALFPA GSDMSSLSMP FTGSPSEATS DAAVPDDLSA YFSTSEAGGN GYMPEMASSA QEDDNFLNEA MDTGKMGRPD SLHRVASLEH LQKRMCGGPA
401: SSGSTS
101: VDPVEYNAML KQKLEKDLAA VAMWRASGAM PPERFAASPS LPNADVQHIG TINPIGGNVV PVQNKLAGGA SGVSGPHLVQ NADALVKQAA SSSSREQSED
201: DDMEGEDEIT GNGPPTDQRL RRRKQSNRES ARRSRSRKAA HLNELEAQVS QLRVENSSLL RRLADVNQKY NGAAVDNRVL KADVETLRAK VKMAEDSVKR
301: VTGMSALFPA GSDMSSLSMP FTGSPSEATS DAAVPDDLSA YFSTSEAGGN GYMPEMASSA QEDDNFLNEA MDTGKMGRPD SLHRVASLEH LQKRMCGGPA
401: SSGSTS
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.