CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90165
EER90738
EER95953
EER96530
EES04085
EES14897
EES16316
KXG29589
KXG34539
OQU89229

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	EER96530	AT1G75390.1	16709202
AT3G54620.1	EES14897	AT1G75390.1	16709202
AT3G54620.1	EER96530	AT2G18160.1	16709202
AT3G54620.1	EES14897	AT2G18160.1	16709202
AT3G54620.1	EES04085	AT3G24650.1	12657652
AT3G54620.1	OQU89229	AT3G24650.1	12657652
AT3G54620.1	EER90738	AT3G54620.1	16709202
AT3G54620.1	EER95953	AT3G54620.1	16709202
AT3G54620.1	EES16316	AT3G54620.1	16709202
AT3G54620.1	KXG34539	AT3G54620.1	16709202
AT3G54620.1	EER96530	AT3G62420.1	16709202
AT3G54620.1	EES14897	AT3G62420.1	16709202
AT3G54620.1	EER96530	AT3G62420.1	16810321
AT3G54620.1	EES14897	AT3G62420.1	16810321
AT3G54620.1	EER96530	AT4G34590.1	16709202
AT3G54620.1	EES14897	AT4G34590.1	16709202
AT3G54620.1	EER90165	AT5G24800.1	16709202
AT3G54620.1	KXG29589	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034457_P003	Maize	nucleus	84.94	84.11
Zm00001d034447_P001	Maize	nucleus	54.07	80.81
Zm00001d013074_P003	Maize	cytosol	80.99	74.89
Zm00001d034455_P001	Maize	nucleus	50.86	73.31
TraesCS5A01G440400.1	Wheat	nucleus	67.65	69.9
TraesCS5B01G444100.2	Wheat	nucleus	68.15	69.0
TraesCS5D01G447500.1	Wheat	nucleus	68.15	67.98
Os03t0796900-01	Rice	nucleus	67.9	64.71
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	20.25	58.16
HORVU5Hr1G106120.3	Barley	nucleus	68.4	58.07
Bra010010.1-P	Field mustard	nucleus	30.37	39.17
CDX86210	Canola	nucleus	30.12	38.85
Bra020620.1-P	Field mustard	nucleus	29.88	38.41
CDY48665	Canola	nucleus	30.12	38.36
CDY05606	Canola	nucleus	30.12	38.24
AT5G28770.2	Thale cress	nucleus	29.38	37.9
CDY33887	Canola	nucleus	29.38	37.78
PGSC0003DMT400050096	Potato	nucleus	41.73	37.47
Solyc01g097330.2.1	Tomato	nucleus	41.48	37.0
KRG89569	Soybean	nucleus	18.52	34.88
KXG34539	Sorghum	nucleus	34.57	34.65
CDX73466	Canola	nucleus	31.36	33.6
CDX78251	Canola	nucleus	30.37	32.03
Bra000102.1-P	Field mustard	nucleus	28.89	31.97
CDY55832	Canola	nucleus	24.44	31.43
Bra007083.1-P	Field mustard	nucleus	29.63	31.25
EER95953	Sorghum	nucleus	33.58	30.56
CDY14423	Canola	nucleus	27.9	30.38
CDY07692	Canola	nucleus	27.9	30.29
Bra036251.1-P	Field mustard	nucleus	28.64	29.44
EES16316	Sorghum	nucleus	22.96	29.34
AT3G54620.1	Thale cress	nucleus	29.14	29.28
CDY21903	Canola	nucleus	28.4	29.19
CDY22069	Canola	nucleus	27.65	28.35
EER90165	Sorghum	nucleus	19.75	27.87
AT4G02640.2	Thale cress	nucleus	28.4	27.58
KXG29589	Sorghum	nucleus	20.49	25.94
VIT_00s1609g00010.t01	Wine grape	cytosol	4.94	13.89

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	EntrezGene:8061169	InterPro:Basic_leucine-zipper_C	UniProt:C5WX70
ncoils:Coil	EnsemblPlants:EER90738	ProteinID:EER90738	ProteinID:EER90738.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	PFAM:PF00170	PFAM:PF12498
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF90	SMART:SM00338	EnsemblPlantsGene:SORBI_3001G056700	SUPFAM:SSF57959
unigene:Sbi.10822	UniParc:UPI0001A82114	RefSeq:XP_002463740.1	InterPro:bZIP	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:4275459..4279430

Molecular Weight (calculated)

42339.3 Da

IEP (calculated)

5.157

GRAVY (calculated)

-0.455

Length

405 amino acids

Sequence
(BLAST)

001: MERVFSVEEI PNPYWAPPHP QSAAAGAVAA PGGGGGAVDA AGAMNRCPSE WYFQKFLEEA VLDSPGPVPG VGRGSVVAGA EAPESKPLGP AAASSSVVDP
101: VEYNAMLKQK LEKDLAAVAM WRASGAAPPD RSAVASSLPS VDVPHAAPLK PIGGTESLVQ NKLAGAPGVG SGPHVVQTAD IPIKQTTSSS SREQSDDDDM
201: EGDAETTGNA NPVQQRLQRR KQSNRESARR SRSRKAAHLN ELEAQVAQLR VENSSLLRRL ADVNQKFNEA AVDNRVLKAD VETLRAKVKM AEDSVKRVTG
301: MNALFPAVSD MSSLSMPFNG SPTDSTSDAA VPIQDDPNSY FANPSEIGGN NGYMPDIASS VQEDDNFVNG AAGKMGRTAS LQRVASLEHL QKRMCGGPAS
401: SGSTS

Best Arabidopsis Sequence Match ( AT5G28770.2 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.