Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
 nucleus: 21132161
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH26418 Soybean endoplasmic reticulum 92.65 85.88
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum 63.44 76.46
GSMUA_Achr8P18890_001 Banana cytosol 62.72 75.27
KRH24870 Soybean endoplasmic reticulum 76.7 73.92
KRH29922 Soybean endoplasmic reticulum 76.52 72.87
Solyc04g049450.2.1 Tomato endoplasmic reticulum, nucleus, plastid 69.89 69.27
PGSC0003DMT400033517 Potato endoplasmic reticulum, mitochondrion 69.53 68.92
CDY53631 Canola endoplasmic reticulum 68.46 64.09
Bra002464.1-P Field mustard endoplasmic reticulum 68.28 63.93
CDY31525 Canola endoplasmic reticulum 68.28 63.93
AT5G60640.1 Thale cress endoplasmic reticulum 67.92 63.48
CDY09193 Canola endoplasmic reticulum 66.67 63.37
Bra020239.1-P Field mustard endoplasmic reticulum 65.95 62.59
Bra007120.1-P Field mustard endoplasmic reticulum 64.7 62.35
CDX73422 Canola endoplasmic reticulum 64.34 62.33
CDY56958 Canola endoplasmic reticulum 64.52 62.18
AT3G54960.1 Thale cress endoplasmic reticulum 63.26 60.97
Os02t0100100-01 Rice plasma membrane 60.22 59.68
EES06089 Sorghum endoplasmic reticulum 60.75 59.27
Zm00001d014912_P003 Maize extracellular, plasma membrane 58.96 58.65
Zm00001d054106_P003 Maize endoplasmic reticulum 59.32 57.97
TraesCS6A01G001100.1 Wheat endoplasmic reticulum 59.5 57.04
TraesCS6A01G000600.1 Wheat endoplasmic reticulum 58.96 56.82
TraesCS6D01G005200.1 Wheat golgi 59.86 56.8
TraesCS6D01G004700.1 Wheat endoplasmic reticulum 59.32 56.39
TraesCS3B01G532200.1 Wheat endoplasmic reticulum 59.14 56.12
TraesCS6B01G005500.1 Wheat endoplasmic reticulum 58.42 54.88
HORVU6Hr1G001700.1 Barley endoplasmic reticulum, plastid 59.86 52.6
KRH69241 Soybean endoplasmic reticulum 6.45 42.86
TraesCS6B01G005100.1 Wheat endoplasmic reticulum 28.32 39.3
KRH23443 Soybean endoplasmic reticulum 29.21 32.86
KRH18702 Soybean endoplasmic reticulum 29.03 32.73
KRH16370 Soybean endoplasmic reticulum 29.03 32.66
KRH53259 Soybean endoplasmic reticulum 29.21 32.41
KRH09876 Soybean endoplasmic reticulum 29.75 31.74
KRH64644 Soybean nucleus 28.67 30.48
KRH53258 Soybean mitochondrion 20.79 29.44
KRH31823 Soybean endoplasmic reticulum 18.82 28.85
KRH68449 Soybean endoplasmic reticulum 17.38 26.8
KRH34995 Soybean endoplasmic reticulum 20.43 26.33
KRH64647 Soybean cytosol, mitochondrion 9.86 25.94
KRG96732 Soybean endoplasmic reticulum 17.03 24.87
KRH69242 Soybean cytosol 12.54 24.65
KRH54865 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 12.37 21.77
KRH14820 Soybean endoplasmic reticulum 16.85 21.46
KRH73319 Soybean endoplasmic reticulum 16.31 20.78
KRH10410 Soybean endoplasmic reticulum 5.2 20.57
KRH22935 Soybean endoplasmic reticulum 5.2 19.73
Protein Annotations
EntrezGene:100804924Gene3D:3.40.30.10MapMan:50.5.3EMBL:ACUP02008440InterPro:Disulphide_isomeraseEnsemblPlantsGene:GLYMA_13G326200
GO:GO:0003674GO:GO:0003756GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987
GO:GO:0016853GO:GO:0019725GO:GO:0034976GO:GO:0045454UniProt:I1M4K9InterPro:IPR013766
EnsemblPlants:KRH22896ProteinID:KRH22896ProteinID:KRH22896.1PFAM:PF00085PFAM:PF13848PRINTS:PR00421
ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR18929PANTHER:PTHR18929:SF121InterPro:Prot_disulphide_isomeraseSUPFAM:SSF52833
SignalP:SignalP-noTMTIGRFAMs:TIGR01126TIGRFAMs:TIGR01130InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domain
UniParc:UPI000233AC6FSEG:seg::::
Description
hypothetical protein
Coordinates
chr13:+:42127387..42131740
Molecular Weight (calculated)
62385.2 Da
IEP (calculated)
4.472
GRAVY (calculated)
-0.369
Length
558 amino acids
Sequence
(BLAST)
001: MRILVLLSLA TLLLFSSFSP TFCDHLADDE DLSFLDEPSA APEHDHHYGA DDSNFGDFED FEEDDAEAYK QPEVDEKDVV VLKEKNFTDA VKNNRFVMVE
101: FYAPWCGHCQ ALAPEYAAAA TELKGEDVIL AKVDATEENE LAQQYDVQGF PTVHFFVDGI HKPYNGQRTK DAIVTWIRKK IGPGIYNLTT VEEAQRILTN
201: ETKVVLGFLN SLVGPESEEL AAASRLEDDV NFYQTVNPDV AKLFHIDQDV KRPALILIKK EEEKLNHFDG KFEKSAIADF VFSNKLPLVT IFTRESAPSV
301: FENPIKKQLL LFATSNDSET LVPAFKEAAK SFKGKLIFVY VEMDNEDVGK PVSEYFGISG NAPKVLGYTG NDDGKKFVLD GEVTTDKIKA FGEDFVEDKL
401: KPFYKSDPVP ESNDGDVKIV VGNNFDEIVL DESKDVLLEI YAPWCGHCQS LEPIYNKLAK HLRNIDSLVI AKMDGTTNEH PRAKPDGFPT LLFFPAGNKS
501: FDPITVDTDR TVVAFYKFLK KHASIPFKLQ KPTSTSESDS KGSSDAKESQ SSDVKDEL
Best Arabidopsis Sequence Match ( AT5G60640.1 )
(BLAST)
001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL
Arabidopsis Description
PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.