CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64647	Soybean	cytosol, mitochondrion	44.42	82.55
KRH53259	Soybean	endoplasmic reticulum	74.37	58.25
KRH64644	Soybean	nucleus	76.65	57.52
KRH16370	Soybean	endoplasmic reticulum	69.54	55.24
KRH18702	Soybean	endoplasmic reticulum	68.53	54.55
VIT_18s0001g02510.t01	Wine grape	endoplasmic reticulum	68.02	53.71
PGSC0003DMT400045299	Potato	endoplasmic reticulum	64.21	50.91
Solyc06g060290.2.1	Tomato	plastid	55.08	49.54
KRH69241	Soybean	endoplasmic reticulum	7.11	33.33
KRH31823	Soybean	endoplasmic reticulum	19.8	21.43
KRH29922	Soybean	endoplasmic reticulum	31.22	20.99
KRH24870	Soybean	endoplasmic reticulum	30.71	20.9
KRH22896	Soybean	endoplasmic reticulum	29.44	20.79
KRH68449	Soybean	endoplasmic reticulum	18.78	20.44
KRG96732	Soybean	endoplasmic reticulum	18.78	19.37
KRH26418	Soybean	endoplasmic reticulum	29.19	19.1
KRH69242	Soybean	cytosol	12.69	17.61
KRH09876	Soybean	endoplasmic reticulum	23.1	17.4
KRH23443	Soybean	endoplasmic reticulum	21.57	17.14
KRH34995	Soybean	endoplasmic reticulum	18.78	17.09
KRH14820	Soybean	endoplasmic reticulum	18.27	16.44
KRH10410	Soybean	endoplasmic reticulum	5.84	16.31
KRH73319	Soybean	endoplasmic reticulum	18.02	16.21
KRH22935	Soybean	endoplasmic reticulum	5.84	15.65
KRH54865	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	12.44	15.46

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A0R0JFJ6	EMBL:ACUP02003456	EnsemblPlantsGene:GLYMA_06G114700	GO:GO:0003674
GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0034976	GO:GO:0045454	InterPro:IPR013766	EnsemblPlants:KRH53258	ProteinID:KRH53258	ProteinID:KRH53258.1
PFAM:PF00085	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0006ED80A4	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:9307220..9315112

Molecular Weight (calculated)

44400.3 Da

IEP (calculated)

5.925

GRAVY (calculated)

-0.532

Length

394 amino acids

Sequence
(BLAST)

001: MVYSADESDV LTLDHSNFSD TVSTYSLIVV EFYAPRCGHC KKLAPEYKKV ASILSSHDPP IVLAKVDAMT RRTKTLHQNL KLGILRNGGK NVQEYKGPHE
101: ADGIVDYLKK QSCSVSKFSG EEFDNFTAEK LRADYDLGHT MNAKHLPRGE SSVTGPIVRL FNPFDEFFVD FQLQSQFKGA ESFKSKYRET AEQYRQQGLS
201: FLVRDVKSTK GSFQYFGVKE DQVPLITVTR NDGKKFLKPN LEPDHMSTWL KAYKEGNIAP YFKSEPIPEA NNEPVKVVVG DSLQDIVFNS GKNVLLEFSS
301: PWCGYCIELA PILEEVAVSY QSDADVTIAK LDGVANDIPR ETFEVRGYPT VYFRSASGKI SQYDGNRTKE DIIEFIEKNQ DKPAQQGKDE LEKG

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.