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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 8
  • extracellular 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
 mitochondrion: 25806999
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 25806999 doi
AH Kamal, S Komatsu
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG96732 Soybean endoplasmic reticulum 90.88 86.13
PGSC0003DMT400007185 Potato endoplasmic reticulum 78.18 78.83
Solyc01g100320.2.1 Tomato extracellular 77.35 77.99
KRH69242 Soybean cytosol 61.05 77.82
KRH31823 Soybean endoplasmic reticulum 75.41 75.0
GSMUA_Achr11P... Banana endoplasmic reticulum 73.76 73.76
GSMUA_Achr2P02130_001 Banana endoplasmic reticulum 71.27 71.27
Os01t0339900-01 Rice plasma membrane 72.65 70.89
Os05t0156300-01 Rice plasma membrane 71.82 70.84
Zm00001d040766_P001 Maize plasma membrane 71.27 70.3
EES00714 Sorghum endoplasmic reticulum 71.27 70.11
EES19066 Sorghum endoplasmic reticulum 70.17 69.21
KRH54865 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 60.5 69.09
TraesCS1D01G106500.1 Wheat endoplasmic reticulum 69.61 68.66
TraesCS1B01G126100.1 Wheat endoplasmic reticulum 69.61 68.66
TraesCS1A01G097700.1 Wheat golgi 69.61 68.66
Zm00001d037590_P002 Maize endoplasmic reticulum 70.17 67.2
HORVU1Hr1G022810.1 Barley endoplasmic reticulum 70.44 63.28
KRH69241 Soybean endoplasmic reticulum 14.09 60.71
Zm00001d009651_P001 Maize endoplasmic reticulum 29.56 52.45
Zm00001d024894_P016 Maize plastid 43.92 46.36
Zm00001d015747_P022 Maize plastid 43.92 46.36
KRH10410 Soybean endoplasmic reticulum 13.26 34.04
KRH22935 Soybean endoplasmic reticulum 13.26 32.65
KRH14820 Soybean endoplasmic reticulum 29.28 24.2
KRH73319 Soybean endoplasmic reticulum 29.01 23.97
KRH53258 Soybean mitochondrion 20.44 18.78
KRH18702 Soybean endoplasmic reticulum 25.41 18.59
KRH53259 Soybean endoplasmic reticulum 25.41 18.29
KRH64644 Soybean nucleus 26.24 18.1
KRH16370 Soybean endoplasmic reticulum 24.59 17.94
KRH22896 Soybean endoplasmic reticulum 26.8 17.38
KRH29922 Soybean endoplasmic reticulum 27.62 17.06
KRH24870 Soybean endoplasmic reticulum 26.8 16.75
KRH26418 Soybean endoplasmic reticulum 26.8 16.11
KRH23443 Soybean endoplasmic reticulum 19.89 14.52
KRH34995 Soybean endoplasmic reticulum 17.13 14.32
KRH64647 Soybean cytosol, mitochondrion 8.01 13.68
KRH09876 Soybean endoplasmic reticulum 19.61 13.58
Protein Annotations
Gene3D:1.20.1150.12EntrezGene:100796355Gene3D:3.40.30.10MapMan:35.1EMBL:ACUP02002116ncoils:Coil
InterPro:Disulphide_isomeraseInterPro:ERp29_CInterPro:ERp29_C_sfEnsemblPlantsGene:GLYMA_03G232000GO:GO:0003674GO:GO:0003756
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987GO:GO:0016853GO:GO:0019725
GO:GO:0034976GO:GO:0045454UniProt:I1JR62InterPro:IPR013766InterPro:IPR036356EnsemblPlants:KRH68449
ProteinID:KRH68449ProteinID:KRH68449.1PFAM:PF00085PFAM:PF07749PRINTS:PR00421ScanProsite:PS00194
PFscan:PS51352PANTHER:PTHR18929PANTHER:PTHR18929:SF187SUPFAM:SSF47933SUPFAM:SSF52833SignalP:SignalP-noTM
TIGRFAMs:TIGR01126InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI000233A025SEG:seg
Description
hypothetical protein
Coordinates
chr3:+:43324347..43328011
Molecular Weight (calculated)
39870.5 Da
IEP (calculated)
5.611
GRAVY (calculated)
-0.274
Length
362 amino acids
Sequence
(BLAST)
001: MWSSKTTLMF GVAAIALMMF LSSASADDVV ALTEETFENE VGKDRAALVE FYAPWCGHCK RLAPEYEQLG TTFKKTKSVL IAKVDCDEQK SVCSKYGVSG
101: YPTIQWFPKG SLEPKKYEGA RTAEALAAFV NIEAGTNVKI ASVPSSVVVL SPDNFDEVVL DETKDVLVEF YAPWCGHCKA LAPIYEKVAA AFNLDKDVVM
201: ANVDADKYKD LAEKYGVSGY PTLKFFPKSN KAGEDYNGGR DLDDFVAFIN EKCGTYRDGK GQLTSKAGII ASLDDLVKEF VSADSNEKKA VYSRLEEEVK
301: KLKGSSARHG DLYLKLAKKG IEKGADYAKN EIQRLERMLE KSISPAKADE FTLKKNILST FA
Best Arabidopsis Sequence Match ( AT2G47470.1 )
(BLAST)
001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S
Arabidopsis Description
PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.