Factsheet for Zm00001d040766_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

extracellular: 20408568
plasma membrane: 23353019
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00714	Sorghum	endoplasmic reticulum	94.55	94.29
Os01t0339900-01	Rice	plasma membrane	85.83	84.91
Zm00001d037590_P002	Maize	endoplasmic reticulum	80.38	78.04
GSMUA_Achr2P02130_001	Banana	endoplasmic reticulum	75.48	76.52
GSMUA_Achr11P...	Banana	endoplasmic reticulum	74.93	75.97
KRH69242	Soybean	cytosol	58.04	75.0
KRH31823	Soybean	endoplasmic reticulum	73.3	73.9
AT2G47470.1	Thale cress	endoplasmic reticulum	72.21	73.41
Solyc01g100320.2.1	Tomato	extracellular	71.39	72.98
CDY57723	Canola	endoplasmic reticulum	71.66	72.85
Bra000454.1-P	Field mustard	endoplasmic reticulum	71.66	72.65
PGSC0003DMT400007185	Potato	endoplasmic reticulum	70.84	72.42
CDX83326	Canola	endoplasmic reticulum	71.39	72.38
Bra004455.1-P	Field mustard	endoplasmic reticulum	71.12	72.3
CDX80106	Canola	endoplasmic reticulum	71.12	72.3
CDX95726	Canola	endoplasmic reticulum	70.84	71.82
KRH68449	Soybean	endoplasmic reticulum	70.3	71.27
KRH69241	Soybean	endoplasmic reticulum	15.53	67.86
KRH54865	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	57.49	66.56
KRG96732	Soybean	endoplasmic reticulum	67.03	64.4
Zm00001d019793_P001	Maize	cytosol	3.54	61.9
Zm00001d009651_P001	Maize	endoplasmic reticulum	33.52	60.29
CDX95413	Canola	cytosol	38.15	58.58
Zm00001d015747_P022	Maize	plastid	50.41	53.94
Zm00001d024894_P016	Maize	plastid	50.14	53.64
Zm00001d028726_P001	Maize	plastid	13.9	27.87
Zm00001d005866_P003	Maize	endoplasmic reticulum	28.07	23.36
Zm00001d020687_P002	Maize	endoplasmic reticulum	28.07	23.36
Zm00001d028108_P001	Maize	mitochondrion	7.08	18.57
Zm00001d007301_P001	Maize	endoplasmic reticulum	25.34	16.94
Zm00001d049099_P005	Maize	endoplasmic reticulum	23.98	16.54
Zm00001d054106_P003	Maize	endoplasmic reticulum	25.07	16.11
Zm00001d016017_P002	Maize	cytosol	11.17	16.08
Zm00001d014912_P003	Maize	extracellular, plasma membrane	24.25	15.86
Zm00001d016786_P001	Maize	plasma membrane	17.98	15.71
Zm00001d025131_P001	Maize	extracellular, plasma membrane	16.89	14.76
Zm00001d003654_P001	Maize	endoplasmic reticulum	16.62	13.8
Zm00001d035557_P001	Maize	mitochondrion	11.72	12.54
Zm00001d045218_P002	Maize	endoplasmic reticulum	16.89	11.72
Zm00001d041417_P001	Maize	endoplasmic reticulum	6.54	10.86

Protein Annotations

Gene3D:1.20.1150.12	Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:606413	EMBL:AY739288	EMBL:BT063570
InterPro:Disulphide_isomerase	InterPro:ERp29_C	InterPro:ERp29_C_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009987
GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:IPR036356	ProteinID:ONM31993.1
PFAM:PF00085	PFAM:PF07749	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929
PANTHER:PTHR18929:SF187	UniProt:Q5EUD7	SUPFAM:SSF47933	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI00004CF281	EnsemblPlantsGene:Zm00001d040766
EnsemblPlants:Zm00001d040766_P001	EnsemblPlants:Zm00001d040766_T001	SEG:seg	:	:	:

Description

protein disulfide isomerase6 protein disulfide isomerase6

Coordinates

chr3:+:64552842..64556161

Molecular Weight (calculated)

40124.8 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.255

Length

367 amino acids

Sequence
(BLAST)

001: MAISQISRIF LAILLLAAAF AAAPAALADG DDVVALTEST FEKEVGKDRG ALVEFYAPWC GHCKKLAPEY ERLGASFKKA KSVLIAKVDC DEHKSLCSKY
101: GVSGYPTIQW FPKGSLEPKK YEGQRTAEAL AEFLNTEGGT NVKLATIPSS VVVLTPETFD SIVLDETKDV LVEFYAPWCG HCKSLAPTYE KVASVFKLDE
201: GVVIANLDAD KHRDLAEKYG VSGFPTLKFF PKGNKAGEDY DGDRDLVDFV KFINEKSGTS RDTKGQLTSE AGRIASLDVL AKEFLGASGD KRKEVLSSME
301: EEADKLSGSA ARHGKVYVTI AKKILEKGNE YTEKETKRLD RILEKSISPS KADEFIIKKN VLSTFSS

Best Arabidopsis Sequence Match ( AT2G47470.1 )
(BLAST)

001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S

Arabidopsis Description

PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.