Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80106 | Canola | endoplasmic reticulum | 98.89 | 98.89 |
| CDX83326 | Canola | endoplasmic reticulum | 93.63 | 93.37 |
| AT2G47470.1 | Thale cress | endoplasmic reticulum | 92.8 | 92.8 |
| CDX95726 | Canola | endoplasmic reticulum | 91.69 | 91.44 |
| CDX95413 | Canola | cytosol | 53.19 | 80.33 |
| KRH31823 | Soybean | endoplasmic reticulum | 75.35 | 74.73 |
| Solyc01g100320.2.1 | Tomato | extracellular | 73.68 | 74.09 |
| PGSC0003DMT400007185 | Potato | endoplasmic reticulum | 73.13 | 73.54 |
| KRH69242 | Soybean | cytosol | 57.62 | 73.24 |
| GSMUA_Achr2P02130_001 | Banana | endoplasmic reticulum | 72.85 | 72.65 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 72.85 | 72.65 |
| Zm00001d040766_P001 | Maize | plasma membrane | 72.85 | 71.66 |
| KRH69241 | Soybean | endoplasmic reticulum | 16.62 | 71.43 |
| Os05t0156300-01 | Rice | plasma membrane | 72.3 | 71.12 |
| EES19066 | Sorghum | endoplasmic reticulum | 71.75 | 70.57 |
| EES00714 | Sorghum | endoplasmic reticulum | 71.75 | 70.38 |
| TraesCS1D01G106500.1 | Wheat | endoplasmic reticulum | 71.19 | 70.03 |
| TraesCS1A01G097700.1 | Wheat | golgi | 71.19 | 70.03 |
| TraesCS1B01G126100.1 | Wheat | endoplasmic reticulum | 71.19 | 70.03 |
| Os01t0339900-01 | Rice | plasma membrane | 70.91 | 69.0 |
| Zm00001d037590_P002 | Maize | endoplasmic reticulum | 70.91 | 67.72 |
| KRH54865 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 57.06 | 64.98 |
| HORVU1Hr1G022810.1 | Barley | endoplasmic reticulum | 71.19 | 63.77 |
| Zm00001d009651_P001 | Maize | endoplasmic reticulum | 30.75 | 54.41 |
| Zm00001d024894_P016 | Maize | plastid | 44.32 | 46.65 |
| Zm00001d015747_P022 | Maize | plastid | 43.77 | 46.06 |
| CDX95112 | Canola | endoplasmic reticulum | 14.13 | 35.42 |
| CDX93606 | Canola | endoplasmic reticulum | 13.85 | 34.72 |
| CDY53400 | Canola | endoplasmic reticulum | 25.48 | 27.22 |
| CDX79207 | Canola | cytosol | 8.59 | 25.62 |
| CDY18278 | Canola | endoplasmic reticulum | 28.81 | 23.85 |
| CDX79497 | Canola | endoplasmic reticulum | 29.09 | 23.7 |
| CDY52544 | Canola | endoplasmic reticulum | 28.53 | 23.2 |
| CDY12149 | Canola | endoplasmic reticulum | 28.25 | 23.02 |
| CDX96575 | Canola | endoplasmic reticulum | 27.15 | 19.56 |
| CDY38821 | Canola | cytosol, endoplasmic reticulum | 26.87 | 19.4 |
| CDY01314 | Canola | endoplasmic reticulum | 26.59 | 19.35 |
| CDY08176 | Canola | endoplasmic reticulum | 26.59 | 19.28 |
| CDY04673 | Canola | endoplasmic reticulum | 26.59 | 19.28 |
| CDY00400 | Canola | endoplasmic reticulum | 26.87 | 19.25 |
| CDX87514 | Canola | endoplasmic reticulum | 26.59 | 18.86 |
| CDY40898 | Canola | endoplasmic reticulum | 26.32 | 18.63 |
| CDX88376 | Canola | cytosol, endoplasmic reticulum | 26.32 | 18.59 |
| CDY38344 | Canola | endoplasmic reticulum | 26.32 | 18.59 |
| CDY09193 | Canola | endoplasmic reticulum | 27.42 | 16.87 |
| CDX73422 | Canola | endoplasmic reticulum | 26.87 | 16.84 |
| CDY53631 | Canola | endoplasmic reticulum | 27.7 | 16.78 |
| CDY31525 | Canola | endoplasmic reticulum | 27.7 | 16.78 |
| CDY56958 | Canola | endoplasmic reticulum | 26.87 | 16.75 |
| CDX73337 | Canola | endoplasmic reticulum | 16.9 | 14.02 |
| CDY37102 | Canola | endoplasmic reticulum | 16.9 | 14.02 |
| CDY52981 | Canola | endoplasmic reticulum | 19.94 | 13.61 |
| CDY02550 | Canola | endoplasmic reticulum | 19.67 | 13.5 |
| CDY68572 | Canola | endoplasmic reticulum | 19.39 | 13.36 |
| CDY47529 | Canola | endoplasmic reticulum | 18.84 | 12.93 |
Protein Annotations
| Gene3D:1.20.1150.12 | Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078J4Z8 | UniProt:A0A078J4Z8 | EnsemblPlants:CDY57723 |
| ProteinID:CDY57723 | ProteinID:CDY57723.1 | InterPro:Disulphide_isomerase | InterPro:ERp29_C | InterPro:ERp29_C_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00022571001 |
| InterPro:IPR013766 | InterPro:IPR036356 | PFAM:PF00085 | PFAM:PF07749 | PRINTS:PR00421 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF187 | SUPFAM:SSF47933 | SUPFAM:SSF52833 | SignalP:SignalP-noTM |
| TIGRFAMs:TIGR01126 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EDC28B |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g51940DBnaC04g51940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4Z8]
Coordinates
chrLK033598:-:46026..48613
Molecular Weight (calculated)
39477.0 Da
IEP (calculated)
6.194
GRAVY (calculated)
-0.266
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSQIWFGL ALVALLVVSA VADDVVVLTE DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLAASFK KAKSVLIAKV DCDEHKTVCT KYDVSGYPTI
101: KWFPKGSLEP QKYEGPRNAE ALAEFVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPV YEKVATVFKQ EEGVVIANLD
201: ADAHKSLGEK YGVSGFPTLK FFPKDNKAGQ DYDGGRDLDD FVSFINEKVG TSRDSKGQLT SKAGVVESLD ALVKELVAAS EDEKKAVLSR IEEEASNLKG
301: STARYGKLYS SLAKKYIEKG SGYATKEAER LGRVLSKSMS PVKADELTLK RNILNTFVAS S
101: KWFPKGSLEP QKYEGPRNAE ALAEFVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPV YEKVATVFKQ EEGVVIANLD
201: ADAHKSLGEK YGVSGFPTLK FFPKDNKAGQ DYDGGRDLDD FVSFINEKVG TSRDSKGQLT SKAGVVESLD ALVKELVAAS EDEKKAVLSR IEEEASNLKG
301: STARYGKLYS SLAKKYIEKG SGYATKEAER LGRVLSKSMS PVKADELTLK RNILNTFVAS S
001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S
Arabidopsis Description
PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.