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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52544 Canola endoplasmic reticulum 92.78 92.57
CDY12149 Canola endoplasmic reticulum 92.55 92.55
AT2G32920.1 Thale cress endoplasmic reticulum 88.26 88.86
CDY18278 Canola endoplasmic reticulum 75.85 77.06
CDY53400 Canola endoplasmic reticulum 58.69 76.92
KRH73319 Soybean endoplasmic reticulum 74.04 74.89
KRH14820 Soybean endoplasmic reticulum 73.59 74.43
VIT_12s0059g01560.t01 Wine grape endoplasmic reticulum 72.69 74.36
Solyc07g049450.2.1 Tomato nucleus 72.23 74.07
PGSC0003DMT400001769 Potato extracellular 71.78 73.61
GSMUA_Achr7P12170_001 Banana endoplasmic reticulum 70.88 72.85
EER96832 Sorghum endoplasmic reticulum 70.88 71.53
Os09t0451500-02 Rice plasma membrane 71.11 71.43
Zm00001d005866_P003 Maize endoplasmic reticulum 71.11 71.43
Zm00001d020687_P002 Maize endoplasmic reticulum 71.11 71.43
TraesCS5B01G232900.1 Wheat golgi 69.98 70.45
TraesCS5A01G234400.1 Wheat golgi 69.53 70.0
TraesCS5D01G241200.1 Wheat golgi 69.3 69.77
HORVU5Hr1G067570.1 Barley plasma membrane 69.98 59.85
CDX95726 Canola endoplasmic reticulum 24.15 29.56
CDY57723 Canola endoplasmic reticulum 23.7 29.09
CDX83326 Canola endoplasmic reticulum 23.7 29.01
CDX80106 Canola endoplasmic reticulum 23.48 28.81
CDX95112 Canola endoplasmic reticulum 8.13 25.0
CDX93606 Canola endoplasmic reticulum 7.9 24.31
CDX79207 Canola cytosol 6.32 23.14
CDX95413 Canola cytosol 12.42 23.01
CDY01314 Canola endoplasmic reticulum 20.99 18.75
CDX96575 Canola endoplasmic reticulum 20.99 18.56
CDY00400 Canola endoplasmic reticulum 20.99 18.45
CDY40898 Canola endoplasmic reticulum 21.22 18.43
CDY38821 Canola cytosol, endoplasmic reticulum 20.77 18.4
CDY38344 Canola endoplasmic reticulum 21.22 18.4
CDX87514 Canola endoplasmic reticulum 20.77 18.07
CDX88376 Canola cytosol, endoplasmic reticulum 20.77 18.0
CDY08176 Canola endoplasmic reticulum 19.86 17.67
CDY04673 Canola endoplasmic reticulum 19.86 17.67
CDX73422 Canola endoplasmic reticulum 20.77 15.97
CDY56958 Canola endoplasmic reticulum 20.77 15.89
CDY09193 Canola endoplasmic reticulum 19.41 14.65
CDY02550 Canola endoplasmic reticulum 17.16 14.45
CDY53631 Canola endoplasmic reticulum 19.41 14.43
CDY31525 Canola endoplasmic reticulum 19.41 14.43
CDY47529 Canola endoplasmic reticulum 16.7 14.07
CDY52981 Canola endoplasmic reticulum 16.25 13.61
CDY68572 Canola endoplasmic reticulum 16.03 13.55
CDY37102 Canola endoplasmic reticulum 11.96 12.18
CDX73337 Canola endoplasmic reticulum 11.96 12.18
Protein Annotations
MapMan:18.11.1.2Gene3D:3.40.30.10GO:A0A078CRW4EnsemblPlants:CDX79497ProteinID:CDX79497ProteinID:CDX79497.1
InterPro:Disulphide_isomeraseGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0008150
GO:GO:0009987GO:GO:0016853GO:GO:0019725GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00132244001InterPro:IPR013766
PFAM:PF00085PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR18929PANTHER:PTHR18929:SF38
SUPFAM:SSF52833SignalP:SignalP-noTMTIGRFAMs:TIGR01126TMHMM:TMhelixInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CS
InterPro:Thioredoxin_domainUniParc:UPI0004EE3423SEG:seg:::
Description
BnaC03g18330D
Coordinates
chrLK031818:+:391498..394361
Molecular Weight (calculated)
47839.2 Da
IEP (calculated)
6.278
GRAVY (calculated)
-0.126
Length
443 amino acids
Sequence
(BLAST)
001: MFTKSPLTLL TLLSLLIGFF NLGNALYGSS SPVVQLTASN FKSKVLNSNG VVLVEFFAPW CGHCKALTPT WEKVAGVLKG VATVAAIDAD AHQSAAQDYG
101: IKGFPTITVF VPGKPPVDYQ GARDAKSIAN FAYKQVKALV SNRLEGKSKP NGGGSSERKS EPSASVELTS SNFDELVIKS NDLWIVEFFA PWCGHCKKLA
201: PEWKKAAKNL KGKVKLGHVN CDVEQSIMSR FKVQGFPTIM VFGADKSSPY AYEGARSASA IESFATELVE SSAGPVEVTE LTGPDVMEKK CGSAAICFIS
301: FLPDILDSKA EGRNKYLKML QSVAEKYKRH PYSFVWVAAV TQPDLEKKVS VGGYGYPAMV AMNVKKGVYA PLKSAFELQH LLEFVKDAEA GGKGNLPMNG
401: TPEIVDTKAW DGKDGEVIEE DEFSLEELMG GDDDANVGIK DEL
Best Arabidopsis Sequence Match ( AT2G32920.1 )
(BLAST)
001: MYKSPLTLLT LLTICFGFFD LSSALYGSSS PVVQLTASNF KSKVLNSNGV VLVEFFAPWC GHCKALTPTW EKVANILKGV ATVAAIDADA HQSAAQDYGI
101: KGFPTIKVFV PGKAPIDYQG ARDAKSIANF AYKQIKGLLS DRLEGKSKPT GGGSKEKKSE PSASVELNAS NFDDLVIESN ELWIVEFFAP WCGHCKKLAP
201: EWKRAAKNLQ GKVKLGHVNC DVEQSIMSRF KVQGFPTILV FGPDKSSPYP YEGARSASAI ESFASELVES SAGPVEVTEL TGPDVMEKKC GSAAICFISF
301: LPDILDSKAE GRNKYLEMLL SVAEKFKKQP YSFMWVAAVT QMDLEKRVNV GGYGYPAMVA MNVKKGVYAP LKSAFELQHL LEFVKDAGTG GKGNVPMNGT
401: PEIVKTKEWD GKDGELIEED EFSLDELMGG DDAVGSKDEL
Arabidopsis Description
PDIL2-3Protein disulfide-isomerase 2-3 [Source:UniProtKB/Swiss-Prot;Acc:O48773]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.