Factsheet for PGSC0003DMT400001769

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

extracellular: 24773703

msms PMID: 24773703 doi

T Bengtsson, D Weighill, E Proux-Wéra, F Levander, S Resjö, DD Burra, LI Moushib, PE Hedley, E Liljeroth, D Jacobson, E Alexandersson, E Andreasson

Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Box 102, SE-230 53 Alnarp, Sweden. erik.alexandersson@slu.se.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g049450.2.1	Tomato	nucleus	98.61	98.61
VIT_12s0059g01560.t01	Wine grape	endoplasmic reticulum	80.32	80.14
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	78.94	79.12
KRH73319	Soybean	endoplasmic reticulum	79.86	78.77
KRH14820	Soybean	endoplasmic reticulum	79.63	78.54
Os09t0451500-02	Rice	plasma membrane	77.55	75.96
EER96832	Sorghum	endoplasmic reticulum	76.62	75.4
Zm00001d020687_P002	Maize	endoplasmic reticulum	76.62	75.06
TraesCS5B01G232900.1	Wheat	golgi	75.93	74.55
TraesCS5A01G234400.1	Wheat	golgi	75.69	74.32
Zm00001d005866_P003	Maize	endoplasmic reticulum	75.46	73.92
Bra015375.1-P	Field mustard	endoplasmic reticulum	73.61	73.61
TraesCS5D01G241200.1	Wheat	golgi	74.77	73.41
CDY18278	Canola	endoplasmic reticulum	73.38	72.71
CDY53400	Canola	endoplasmic reticulum	56.71	72.49
CDY12149	Canola	endoplasmic reticulum	74.31	72.46
Bra005546.1-P	Field mustard	endoplasmic reticulum	74.31	72.46
CDY52544	Canola	endoplasmic reticulum	74.31	72.3
CDX79497	Canola	endoplasmic reticulum	73.61	71.78
AT1G04980.1	Thale cress	endoplasmic reticulum	73.84	71.36
AT2G32920.1	Thale cress	endoplasmic reticulum	72.45	71.14
HORVU5Hr1G067570.1	Barley	plasma membrane	75.93	63.32
PGSC0003DMT400007185	Potato	endoplasmic reticulum	25.23	30.36
PGSC0003DMT400060279	Potato	cytosol	9.72	23.08
PGSC0003DMT400045299	Potato	endoplasmic reticulum	23.15	20.12
PGSC0003DMT400010624	Potato	endoplasmic reticulum	21.3	18.62
PGSC0003DMT400036388	Potato	endoplasmic reticulum	19.21	16.97
PGSC0003DMT400050665	Potato	endoplasmic reticulum	7.87	16.83
PGSC0003DMT400020867	Potato	endoplasmic reticulum	21.06	15.72
PGSC0003DMT400033517	Potato	endoplasmic reticulum, mitochondrion	19.91	15.28
PGSC0003DMT400008689	Potato	endoplasmic reticulum	18.06	14.1
PGSC0003DMT400006756	Potato	endoplasmic reticulum	15.74	12.64
PGSC0003DMT400070983	Potato	endoplasmic reticulum	12.27	12.21
PGSC0003DMT400067074	Potato	endoplasmic reticulum	12.96	11.5

Protein Annotations

EntrezGene:102581673	MapMan:18.11.1.2	Gene3D:3.40.30.10	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788
GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
UniProt:M0ZJ17	PFAM:PF00085	EnsemblPlantsGene:PGSC0003DMG400000661	PGSC:PGSC0003DMG400000661	EnsemblPlants:PGSC0003DMT400001769	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF38	SUPFAM:SSF52833	SignalP:SignalP-noTM
TIGRFAMs:TIGR01126	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002954618	RefSeq:XP_006357974.1
SEG:seg	:	:	:	:	:

Description

Protein disulfide isomerase family [Source:PGSC_GENE;Acc:PGSC0003DMG400000661]

Coordinates

chr7:-:45238995..45246167

Molecular Weight (calculated)

47162.6 Da

IEP (calculated)

5.746

GRAVY (calculated)

-0.165

Length

432 amino acids

Sequence
(BLAST)

001: MDRASVFPLF LIVLHFIATA NALYGPTSPV VQLTESNFKT KVLNSKGIVL VEFFAPWCGH CQALTPIWEK AATILKGVAT VAALDADAHK SLAQEYGIRG
101: FPTIKVFAPG KPPVDYQGAR EAKPIAEYAL QQIKALLKER IHGKATGGSS ESSEPSASVE LNSRNFDENV LKSKDLWIVE FFAPWCGHCK KLAPEWKKAA
201: KNLQGKVKLG HVDCDAEKSL MSRYNVQGFP TILVFGADKE SPVPYEGART ASAIESFGLQ QLETNVAPPE VIELTSPDVM EEKCNSAAIC FVSFLPDILD
301: SKAEGRNKYL EMLLAVAEKF KRNPYSFVWV GAGKQPDLEK HVGVGGYGYP AMVALNVKKG VYAPLKSAFQ RQPIIDFVKE AGLGGKGNLP LAATPSIVKN
401: EPWDGKDGEI IEEDEFSLEE LMGDDTPNKD EL

Best Arabidopsis Sequence Match ( AT1G04980.1 )
(BLAST)

001: MERKMYKSTV FPICCLLFAL FDRGNALYGS SSPVLQLTPS NFKSKVLNSN GVVLVEFFAP WCGHCQSLTP TWEKVASTLK GIATVAAIDA DAHKSVSQDY
101: GVRGFPTIKV FVPGKPPIDY QGARDAKSIS QFAIKQIKAL LKDRLDGKTS GTKNGGGSSE KKKSEPSASV ELNSSNFDEL VTESKELWIV EFFAPWCGHC
201: KKLAPEWKKA ANNLKGKVKL GHVNCDAEQS IKSRFKVQGF PTILVFGSDK SSPVPYEGAR SASAIESFAL EQLESNAGPA EVTELTGPDV MEDKCGSAAI
301: CFVSFLPDIL DSKAEGRNKY LEMLLSVADK FKKDPYGFVW VAAGKQPDLE KRVGVGGYGY PAMVALNAKK GAYAPLKSGF EVKHLKDFVK EAAKGGKGNL
401: PIDGTMEIVK TEAWDGKDGE VVDADEFSLE DLMGNDDEAS TESKDDL

Arabidopsis Description

PDIL2-2Protein disulfide-isomerase like 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAU6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.