Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007120.1-P | Field mustard | endoplasmic reticulum | 97.74 | 97.24 |
| CDY56958 | Canola | endoplasmic reticulum | 97.74 | 97.24 |
| AT3G54960.1 | Thale cress | endoplasmic reticulum | 89.58 | 89.12 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum | 52.6 | 65.44 |
| GSMUA_Achr8P18890_001 | Banana | cytosol | 52.6 | 65.16 |
| KRH22896 | Soybean | endoplasmic reticulum | 62.33 | 64.34 |
| VIT_06s0004g02890.t01 | Wine grape | endoplasmic reticulum | 61.11 | 61.01 |
| VIT_13s0019g04240.t01 | Wine grape | endoplasmic reticulum | 57.99 | 59.54 |
| Solyc11g069400.1.1 | Tomato | plastid | 58.85 | 58.45 |
| KRH24870 | Soybean | endoplasmic reticulum | 58.68 | 58.38 |
| KRH29922 | Soybean | endoplasmic reticulum | 59.03 | 58.02 |
| KRH26418 | Soybean | endoplasmic reticulum | 60.42 | 57.81 |
| PGSC0003DMT400020867 | Potato | endoplasmic reticulum | 57.99 | 57.69 |
| CDY53631 | Canola | endoplasmic reticulum | 57.47 | 55.54 |
| Os02t0100100-01 | Rice | plasma membrane | 53.99 | 55.24 |
| CDY31525 | Canola | endoplasmic reticulum | 57.12 | 55.2 |
| CDY09193 | Canola | endoplasmic reticulum | 56.08 | 55.03 |
| TraesCS6A01G001100.1 | Wheat | endoplasmic reticulum | 54.51 | 53.95 |
| Zm00001d014912_P003 | Maize | extracellular, plasma membrane | 52.26 | 53.65 |
| TraesCS6A01G000600.1 | Wheat | endoplasmic reticulum | 53.65 | 53.37 |
| EES06089 | Sorghum | endoplasmic reticulum | 52.95 | 53.32 |
| Zm00001d054106_P003 | Maize | endoplasmic reticulum | 52.6 | 53.06 |
| TraesCS6D01G004700.1 | Wheat | endoplasmic reticulum | 53.99 | 52.98 |
| PGSC0003DMT400008689 | Potato | endoplasmic reticulum | 50.52 | 52.62 |
| TraesCS3B01G532200.1 | Wheat | endoplasmic reticulum | 53.65 | 52.55 |
| TraesCS6D01G005200.1 | Wheat | golgi | 53.47 | 52.38 |
| Solyc06g075210.2.1 | Tomato | unclear | 49.31 | 51.73 |
| TraesCS6B01G005500.1 | Wheat | endoplasmic reticulum | 53.12 | 51.52 |
| HORVU6Hr1G001700.1 | Barley | endoplasmic reticulum, plastid | 53.99 | 48.98 |
| TraesCS6B01G005100.1 | Wheat | endoplasmic reticulum | 26.22 | 37.56 |
| CDY38821 | Canola | cytosol, endoplasmic reticulum | 28.12 | 32.4 |
| CDY08176 | Canola | endoplasmic reticulum | 27.95 | 32.33 |
| CDY04673 | Canola | endoplasmic reticulum | 27.78 | 32.13 |
| CDY00400 | Canola | endoplasmic reticulum | 27.95 | 31.94 |
| CDX96575 | Canola | endoplasmic reticulum | 27.78 | 31.94 |
| CDY01314 | Canola | endoplasmic reticulum | 27.26 | 31.65 |
| CDY38344 | Canola | endoplasmic reticulum | 26.74 | 30.14 |
| CDX87514 | Canola | endoplasmic reticulum | 26.56 | 30.06 |
| CDY40898 | Canola | endoplasmic reticulum | 26.56 | 30.0 |
| CDX88376 | Canola | cytosol, endoplasmic reticulum | 26.39 | 29.75 |
| CDY52981 | Canola | endoplasmic reticulum | 27.26 | 29.68 |
| CDY68572 | Canola | endoplasmic reticulum | 26.74 | 29.39 |
| CDY02550 | Canola | endoplasmic reticulum | 26.56 | 29.09 |
| CDY47529 | Canola | endoplasmic reticulum | 26.56 | 29.09 |
| CDX79207 | Canola | cytosol | 6.08 | 28.93 |
| CDX80106 | Canola | endoplasmic reticulum | 17.01 | 27.15 |
| CDY57723 | Canola | endoplasmic reticulum | 16.84 | 26.87 |
| CDX83326 | Canola | endoplasmic reticulum | 16.49 | 26.24 |
| CDX95726 | Canola | endoplasmic reticulum | 16.32 | 25.97 |
| CDX95112 | Canola | endoplasmic reticulum | 6.25 | 25.0 |
| CDY53400 | Canola | endoplasmic reticulum | 13.89 | 23.67 |
| CDX93606 | Canola | endoplasmic reticulum | 5.9 | 23.61 |
| CDY37102 | Canola | endoplasmic reticulum | 17.36 | 22.99 |
| CDX73337 | Canola | endoplasmic reticulum | 17.19 | 22.76 |
| CDX95413 | Canola | cytosol | 9.2 | 22.18 |
| CDY52544 | Canola | endoplasmic reticulum | 16.32 | 21.17 |
| CDY12149 | Canola | endoplasmic reticulum | 16.15 | 20.99 |
| CDX79497 | Canola | endoplasmic reticulum | 15.97 | 20.77 |
| CDY18278 | Canola | endoplasmic reticulum | 14.76 | 19.5 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:50.5.3 | GO:A0A078C974 | EnsemblPlants:CDX73422 | ProteinID:CDX73422 | ProteinID:CDX73422.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019725 | GO:GO:0045454 |
| EnsemblPlantsGene:GSBRNA2T00108919001 | InterPro:IPR013766 | PFAM:PF00085 | PFAM:PF13848 | PRINTS:PR00421 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR18929 | PANTHER:PTHR18929:SF121 | InterPro:Prot_disulphide_isomerase | SUPFAM:SSF52833 | SignalP:SignalP-noTM |
| TIGRFAMs:TIGR01130 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EF09B1 | SEG:seg |
Description
BnaC08g25810D
Coordinates
chrLK031799:+:284403..287705
Molecular Weight (calculated)
63905.1 Da
IEP (calculated)
4.419
GRAVY (calculated)
-0.304
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTSISLL FLLSFLLLAT SRAENASNGS DLDEELAFIA AEESKEQSHV NSHHDQYRDF ENYEDLEQGG EFHHGEHEGG EYREEEPQLP IVDEKDVAVL
101: TKDNFTEFVG NNSFAMVEFY APWCGACQAL APEYAAAATE LKGVAALAKI DATEEGDLAQ KYEIQGFPTV FLFVDGEMRK TYEGERTKDG IVTWMKKKAS
201: PSIHNITTVE EAERVLSAEP KVVLAFLDSL VGSESAELAA ASRLEDDLSF YQTTSPDIAK LFEIETEVKR PALVLLKKEE EKLARFDGNF TKAALSEFVS
301: ANKVPLVINF TREGASLIFE NSVKNQLILF ATANESEKHL PTLREVAKSF KGKFVFVYVQ MDNEDYGEAV SGFFGVTGTA PKVLVYTGNE DTRKFILDGE
401: LTVNNIKTLA EDFLADKLKP FYKSDPVPES NDGDVKIIVG NNFDEIVLDE SKDVLLEIYA PWCGYCQSFE PIYNKLGKYL KGIDSLVVAK MDGTTNEHPR
501: AKADGFPTIL FFPGGNKSFD PITVDVDRTV VELYKFLKKH ASVPFKLAKP SATPEQVITP KKADEKTESD GAKDEL
101: TKDNFTEFVG NNSFAMVEFY APWCGACQAL APEYAAAATE LKGVAALAKI DATEEGDLAQ KYEIQGFPTV FLFVDGEMRK TYEGERTKDG IVTWMKKKAS
201: PSIHNITTVE EAERVLSAEP KVVLAFLDSL VGSESAELAA ASRLEDDLSF YQTTSPDIAK LFEIETEVKR PALVLLKKEE EKLARFDGNF TKAALSEFVS
301: ANKVPLVINF TREGASLIFE NSVKNQLILF ATANESEKHL PTLREVAKSF KGKFVFVYVQ MDNEDYGEAV SGFFGVTGTA PKVLVYTGNE DTRKFILDGE
401: LTVNNIKTLA EDFLADKLKP FYKSDPVPES NDGDVKIIVG NNFDEIVLDE SKDVLLEIYA PWCGYCQSFE PIYNKLGKYL KGIDSLVVAK MDGTTNEHPR
501: AKADGFPTIL FFPGGNKSFD PITVDVDRTV VELYKFLKKH ASVPFKLAKP SATPEQVITP KKADEKTESD GAKDEL
001: MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL
101: VAVLTKDNFT EFVGNNSFAM VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG EMRKTYEGER TKDGIVTWLK
201: KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA
301: EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI
401: LDGELTVNNI KTLAEDFLAD KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL GKYLKGIDSL VVAKMDGTSN
501: EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL
Arabidopsis Description
PDIL1-3PDIL1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VF09]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.