Factsheet for Solyc11g069400.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plastid: 20363867
plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020867	Potato	endoplasmic reticulum	94.66	94.82
GSMUA_Achr8P18890_001	Banana	cytosol	56.9	70.97
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum	56.38	70.63
Solyc06g075210.2.1	Tomato	unclear	63.45	67.03
CDY09193	Canola	endoplasmic reticulum	64.83	64.05
CDY53631	Canola	endoplasmic reticulum	65.34	63.59
Bra020239.1-P	Field mustard	endoplasmic reticulum	64.31	63.44
CDY31525	Canola	endoplasmic reticulum	65.17	63.42
Bra002464.1-P	Field mustard	endoplasmic reticulum	65.0	63.26
AT5G60640.1	Thale cress	endoplasmic reticulum	64.83	62.98
Solyc04g049450.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	60.69	62.52
CDY56958	Canola	endoplasmic reticulum	59.14	59.24
Bra007120.1-P	Field mustard	endoplasmic reticulum	58.79	58.89
CDX73422	Canola	endoplasmic reticulum	58.45	58.85
AT3G54960.1	Thale cress	endoplasmic reticulum	57.93	58.03
Os02t0100100-01	Rice	plasma membrane	54.31	55.95
EES06089	Sorghum	endoplasmic reticulum	54.83	55.59
Zm00001d054106_P003	Maize	endoplasmic reticulum	54.14	54.99
Zm00001d014912_P003	Maize	extracellular, plasma membrane	52.93	54.72
TraesCS6A01G001100.1	Wheat	endoplasmic reticulum	53.28	53.09
TraesCS6A01G000600.1	Wheat	endoplasmic reticulum	52.76	52.85
TraesCS6D01G004700.1	Wheat	endoplasmic reticulum	52.24	51.62
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	52.24	51.53
TraesCS6D01G005200.1	Wheat	golgi	51.72	51.02
TraesCS6B01G005500.1	Wheat	endoplasmic reticulum	50.69	49.49
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	52.07	47.56
TraesCS6B01G005100.1	Wheat	endoplasmic reticulum	25.69	37.06
Solyc06g060290.2.1	Tomato	plastid	23.97	31.74
Solyc03g120720.2.1	Tomato	plastid	28.97	31.23
Solyc05g056400.2.1	Tomato	plastid	27.93	30.62
Solyc06g005940.2.1	Tomato	nucleus, plastid	25.69	29.86
Solyc01g100320.2.1	Tomato	extracellular	17.93	28.97
Solyc05g018700.2.1	Tomato	plastid	23.79	27.82
Solyc11g069690.1.1	Tomato	extracellular	5.0	23.2
Solyc11g019920.1.1	Tomato	plastid, unclear	16.38	21.84
Solyc06g065320.2.1	Tomato	endoplasmic reticulum	16.03	21.04
Solyc07g049450.2.1	Tomato	nucleus	15.34	20.6

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0034976
GO:GO:0045454	InterPro:IPR013766	UniProt:K4DA96	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	InterPro:Prot_disulphide_isomerase	SUPFAM:SSF52833
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc11g069400.1	EnsemblPlants:Solyc11g069400.1.1	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	TMHMM:TMhelix
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000276A93F	SEG:seg	:

Description

Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:K4DA96]

Coordinates

chr11:-:53989310..53995502

Molecular Weight (calculated)

64581.4 Da

IEP (calculated)

4.243

GRAVY (calculated)

-0.368

Length

580 amino acids

Sequence
(BLAST)

001: MTSRLILLLF LSSLLIFSVL LTPSLAGTGA DDDDDEDLSF LEADDVNDAA PEHTFPTETF SDDDDFDDDE DFENYDDFEV PSAFDDEKEE EGVKFDDKDV
101: VVLTDRNFSD FVEDNKYVMV EFYAPWCGHC KELAPEYAAA ATELKSENVP LVKVDATVEN ELAESYEVQG FPTIYFFVDG EHKTYSGQRT KDAIVTWIKK
201: KIGPGVYNIT TTEDAERVLT SGDKVVLGFL ESLVGPETDQ LAAASKLEDD LNFYQTTNPN VAKLFNVEDT VKRPALVLLK KEEEKVVHYD GQFTKSAIVK
301: FVSANKLPLV TVFTRESGAS IFSSPIKKQV LLFARTNDTD KVFPTFQEAA KHFKGKLIFV FVNMDDEEVG KPVSDYFGAT GDSPKVIGYT GNENPRKYIF
401: DGEITVEKLK AFGEDFLADK LKAFYKSDPI PEDNEGDVKI VVGNNFDDIV LDESKDVLLE IYAPWCGHCQ SLEPTYNKLA KHLRGIESLV IAKMDGTTNE
501: HPQGKAEGFP TLLFFPAGNK TADPIPVDSD RTVVALYKFI KKHATIPFKL QKPASSTTTS ESPEAKVGGN VESKNEKDEL

Best Arabidopsis Sequence Match ( AT5G60640.1 )
(BLAST)

001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL

Arabidopsis Description

PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.