Factsheet for TraesCS6A01G000600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G001100.1	Wheat	endoplasmic reticulum	96.55	96.05
TraesCS6D01G004700.1	Wheat	endoplasmic reticulum	95.68	94.38
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	93.26	91.84
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	89.29	81.42
Os02t0100100-01	Rice	plasma membrane	72.02	74.07
EES06089	Sorghum	endoplasmic reticulum	71.85	72.73
Zm00001d054106_P003	Maize	endoplasmic reticulum	70.98	71.98
Zm00001d014912_P003	Maize	extracellular, plasma membrane	69.43	71.66
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum	48.19	60.78
KRH22896	Soybean	endoplasmic reticulum	56.82	58.96
TraesCS6A01G003200.1	Wheat	endoplasmic reticulum	28.84	56.8
VIT_06s0004g02890.t01	Wine grape	endoplasmic reticulum	56.13	56.33
PGSC0003DMT400033517	Potato	endoplasmic reticulum, mitochondrion	54.58	56.13
Solyc04g049450.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	54.23	55.77
KRH24870	Soybean	endoplasmic reticulum	55.61	55.61
VIT_13s0019g04240.t01	Wine grape	endoplasmic reticulum	53.71	55.44
KRH29922	Soybean	endoplasmic reticulum	55.96	55.29
KRH26418	Soybean	endoplasmic reticulum	56.3	54.15
CDY56958	Canola	endoplasmic reticulum	53.89	53.89
Bra007120.1-P	Field mustard	endoplasmic reticulum	53.71	53.71
CDX73422	Canola	endoplasmic reticulum	53.37	53.65
Bra002464.1-P	Field mustard	endoplasmic reticulum	54.75	53.19
PGSC0003DMT400020867	Potato	endoplasmic reticulum	53.02	53.02
CDY31525	Canola	endoplasmic reticulum	54.58	53.02
AT5G60640.1	Thale cress	endoplasmic reticulum	54.58	52.93
CDY53631	Canola	endoplasmic reticulum	54.4	52.85
Solyc11g069400.1.1	Tomato	plastid	52.85	52.76
AT3G54960.1	Thale cress	endoplasmic reticulum	52.68	52.68
CDY09193	Canola	endoplasmic reticulum	51.99	51.28
Bra020239.1-P	Field mustard	endoplasmic reticulum	51.47	50.68
PGSC0003DMT400008689	Potato	endoplasmic reticulum	48.01	50.27
Solyc06g075210.2.1	Tomato	unclear	46.63	49.18
TraesCS7A01G123900.1	Wheat	endoplasmic reticulum	29.53	31.61
TraesCS4A01G214200.2	Wheat	plastid	27.63	31.07
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	26.42	29.59
TraesCS1A01G097700.1	Wheat	golgi	16.75	26.43
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	17.44	24.46
TraesCS6A01G220100.1	Wheat	golgi	16.75	23.37
TraesCS4A01G107900.1	Wheat	endoplasmic reticulum	5.7	21.85
TraesCS5A01G234400.1	Wheat	golgi	16.41	21.59

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009987
GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	PFAM:PF00085	PFAM:PF13848
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	InterPro:Prot_disulphide_isomerase
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS6A01G000600	EnsemblPlants:TraesCS6A01G000600.1	TIGR:cd02961	TIGR:cd02981
TIGR:cd02982	TIGR:cd02995	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:+:610157..615179

Molecular Weight (calculated)

63178.2 Da

IEP (calculated)

4.338

GRAVY (calculated)

-0.210

Length

579 amino acids

Sequence
(BLAST)

001: MPTPRSLLLL LLLATPFLLL PLAAAAASVP TSNPDIDLEY LIKNAGLDDA TPNDPEDGAP DFPDLDADYE DEDLFGDDDG PEEDSSHPSA ADEAHVLLLT
101: AANFTAVLAA RRHVMVEFYA PWCGHCRALA PHYAAAAAAL AEQGVDVALA KVDATEEHDL AQAHDVQGYP TLLFFIDGVP RDYSGERTKD AIVAWISKKL
201: GPAVQNLTAV DDAEKVVTGD DVAVLAFLDH LSGAHSDELA AASRLEDTIS FYQTTSPDVA KLFHIDPEAK RPSVVLLKKE EEKLTVFDGE FRASAIAEFV
301: SANKIPLITT LTQETAPAIF DNPIKKQILL FAVAKESSKF LPIIKETAKS FKGKLLFVFV ERDNEEVGEP VANYFGITGQ ETTVLAYTGN EDAKKFFFSG
401: EISLDTMKEF AQDFLEDKLT PSYKSDPVPE SNDEDVKVVV GKSLDQIVLD ESKDVLLEVY APWCGHCQSL EPIYNKLAKY LRGIDSLVIA KMDGTNNEHP
501: RAKPDGFPTI LFYPAGKKSF EPITFEGDRT VVEMYKFLKK HAAIPFKLKR PDSSAAQTDD SSSTAEGEKS SGSNPKDEL

Best Arabidopsis Sequence Match ( AT5G60640.1 )
(BLAST)

001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL

Arabidopsis Description

PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.