Factsheet for VIT_06s0004g02890.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P18890_001	Banana	cytosol	63.95	79.35
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum	63.08	78.62
KRH24870	Soybean	endoplasmic reticulum	71.58	71.33
KRH29922	Soybean	endoplasmic reticulum	72.27	71.16
VIT_13s0019g04240.t01	Wine grape	endoplasmic reticulum	67.24	69.16
Solyc04g049450.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	67.42	69.09
PGSC0003DMT400033517	Potato	endoplasmic reticulum, mitochondrion	67.24	68.92
Bra002464.1-P	Field mustard	endoplasmic reticulum	67.59	65.44
CDY53631	Canola	endoplasmic reticulum	67.42	65.27
CDY31525	Canola	endoplasmic reticulum	67.24	65.1
AT5G60640.1	Thale cress	endoplasmic reticulum	66.9	64.66
CDY09193	Canola	endoplasmic reticulum	65.51	64.4
Bra020239.1-P	Field mustard	endoplasmic reticulum	65.16	63.95
CDY56958	Canola	endoplasmic reticulum	61.35	61.14
CDX73422	Canola	endoplasmic reticulum	61.01	61.11
AT3G54960.1	Thale cress	endoplasmic reticulum	61.18	60.97
Bra007120.1-P	Field mustard	endoplasmic reticulum	60.83	60.62
Os02t0100100-01	Rice	plasma membrane	57.71	59.15
EES06089	Sorghum	endoplasmic reticulum	57.54	58.04
Zm00001d054106_P003	Maize	endoplasmic reticulum	56.67	57.27
Zm00001d014912_P003	Maize	extracellular, plasma membrane	55.63	57.22
TraesCS6A01G000600.1	Wheat	endoplasmic reticulum	56.33	56.13
TraesCS6A01G001100.1	Wheat	endoplasmic reticulum	56.33	55.84
TraesCS6D01G004700.1	Wheat	endoplasmic reticulum	55.81	54.86
TraesCS3B01G532200.1	Wheat	endoplasmic reticulum	55.63	54.59
TraesCS6D01G005200.1	Wheat	golgi	55.46	54.42
TraesCS6B01G005500.1	Wheat	endoplasmic reticulum	55.29	53.7
HORVU6Hr1G001700.1	Barley	endoplasmic reticulum, plastid	56.85	51.65
TraesCS6B01G005100.1	Wheat	endoplasmic reticulum	26.52	38.06
VIT_18s0001g02510.t01	Wine grape	endoplasmic reticulum	27.38	31.66
VIT_09s0002g04250.t01	Wine grape	endoplasmic reticulum	29.29	31.47
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	26.34	30.4
VIT_06s0004g03250.t01	Wine grape	endoplasmic reticulum	6.59	25.68
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	16.98	24.75
VIT_12s0059g01560.t01	Wine grape	endoplasmic reticulum	15.08	20.09

Protein Annotations

EntrezGene:100246809	wikigene:100246809	Gene3D:3.40.30.10	MapMan:50.5.3	ProteinID:CCB43668	ProteinID:CCB43668.1
InterPro:Disulphide_isomerase	UniProt:F6GU04	EMBL:FN594951	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0034976
GO:GO:0045454	InterPro:IPR013766	EntrezGene:LOC100246809	wikigene:LOC100246809	PFAM:PF00085	PFAM:PF13848
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121	InterPro:Prot_disulphide_isomerase
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGR:TC69714	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI00015C7EF6	ArrayExpress:VIT_06s0004g02890	EnsemblPlantsGene:VIT_06s0004g02890	EnsemblPlants:VIT_06s0004g02890.t01
unigene:Vvi.9115	RefSeq:XP_002285136	RefSeq:XP_002285136.1	SEG:seg	:	:

Description

Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:F6GU04]

Coordinates

chr6:+:3607599..3613948

Molecular Weight (calculated)

64295.1 Da

IEP (calculated)

4.337

GRAVY (calculated)

-0.374

Length

577 amino acids

Sequence
(BLAST)

001: MSGRLVLLLF LSSLLLFSQF SPSLSTDKND DDLDEDLSFL EQDDVVEPHH SKSGHTSDLD EFDDDALDDD FDNHSDFDEP DSDYGKYSQS EIDEKDVVVL
101: KEKNFSDVIE NNQYVMVEFY APWCGHCQAL APEYAAAATE LKGEKVVLAK VDATEESELA HEYDIQGFPT VYFFIDGVHK PYPGQRTKDA IITWIKKKIG
201: PGVYNITTIE DGERILTSEN KVVLGFLDSL VGPESEELSA GSKLEDDVNF YQTVNPDVAK LFHIDPKVKR PALVLLKKEA EKLSHFNGNF TKSAIAEFVF
301: ANKLPLVTTF TRDSAPLIFE SPIKKQLLLF ATANDSEKVV PAFQEAAKSF KGKIIFVYVE MDNEEIGRPV SDYFGVTGDA PKVLAYTGND DARKFILDGE
401: VTLDKVKAFG EDFLEDKVKP FFKSDPIPES NDEDVKIVVG DNFDEIVLDE SKDVLLEIYA PWCGHCQALE PTYNKLAKHL HGIESLVIAK MDGTTNEHHR
501: AKSDGFPTLL FFPAGNKSSD PITVDTDRTV VALYKFLKTH ASIPFKLQKP ASASKPEGSD AKESDESSSP SDLKDEL

Best Arabidopsis Sequence Match ( AT5G60640.1 )
(BLAST)

001: MAFRVLLLFS LTALLIFSAV SPSFAASSSD DVDDEDLSFL EDLKEDDVPG ADSLSSSTGF DEFEGGEEED PDMYNDDDDE EGDFSDLGNP DSDPLPTPEI
101: DEKDVVVIKE RNFTDVIENN QYVLVEFYAP WCGHCQSLAP EYAAAATELK EDGVVLAKID ATEENELAQE YRVQGFPTLL FFVDGEHKPY TGGRTKETIV
201: TWVKKKIGPG VYNLTTLDDA EKVLTSGNKV VLGYLNSLVG VEHDQLNAAS KAEDDVNFYQ TVNPDVAKMF HLDPESKRPA LVLVKKEEEK ISHFDGEFVK
301: SALVSFVSAN KLALVSVFTR ETAPEIFESA IKKQLLLFVT KNESEKVLTE FQEAAKSFKG KLIFVSVDLD NEDYGKPVAE YFGVSGNGPK LIGYTGNEDP
401: KKYFFDGEIQ SDKIKIFGED FLNDKLKPFY KSDPIPEKND EDVKIVVGDN FDEIVLDDSK DVLLEVYAPW CGHCQALEPM YNKLAKHLRS IDSLVITKMD
501: GTTNEHPKAK AEGFPTILFF PAGNKTSEPI TVDTDRTVVA FYKFLRKHAT IPFKLEKPAS TESPKTAEST PKVETTETKE SPDSTTKSSQ SDSKDEL

Arabidopsis Description

PDIL1-4Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.