Factsheet for Solyc06g065320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
endoplasmic reticulum 7
extracellular 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067074	Potato	endoplasmic reticulum	94.12	85.42
Solyc11g019920.1.1	Tomato	plastid, unclear	70.36	71.49
VIT_18s0075g00210.t01	Wine grape	endoplasmic reticulum	54.75	61.11
HORVU2Hr1G075810.1	Barley	endoplasmic reticulum	53.17	56.76
TraesCS2B01G321000.1	Wheat	golgi	53.39	56.59
KRH34995	Soybean	endoplasmic reticulum	55.43	56.58
Bra034408.1-P	Field mustard	endoplasmic reticulum	55.66	56.55
CDX73337	Canola	endoplasmic reticulum	55.66	56.55
CDY37102	Canola	endoplasmic reticulum	55.66	56.55
TraesCS2A01G304300.1	Wheat	endoplasmic reticulum	52.71	56.42
AT1G35620.1	Thale cress	endoplasmic reticulum	56.11	56.36
Zm00001d025131_P001	Maize	extracellular, plasma membrane	52.94	55.71
EES12182	Sorghum	endoplasmic reticulum	52.49	55.5
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	55.88	55.38
Os04t0432500-01	Rice	plasma membrane	52.94	55.32
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	54.75	54.63
Os02t0550300-00	Rice	endoplasmic reticulum	51.36	53.54
Zm00001d016786_P001	Maize	plasma membrane	50.45	53.1
Zm00001d003654_P001	Maize	endoplasmic reticulum	52.49	52.49
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	52.49	51.44
TraesCS6B01G261500.2	Wheat	endoplasmic reticulum	47.29	50.0
TraesCS6A01G220100.1	Wheat	golgi	46.15	49.16
TraesCS6D01G215100.1	Wheat	endoplasmic reticulum	46.15	48.92
HORVU6Hr1G059710.1	Barley	endoplasmic reticulum	45.93	45.31
OQU85098	Sorghum	endoplasmic reticulum	49.55	44.69
Solyc11g069690.1.1	Tomato	extracellular	7.01	24.8
Solyc06g060290.2.1	Tomato	plastid	18.33	18.49
Solyc06g005940.2.1	Tomato	nucleus, plastid	20.59	18.24
Solyc05g056400.2.1	Tomato	plastid	21.27	17.77
Solyc01g100320.2.1	Tomato	extracellular	14.03	17.27
Solyc05g018700.2.1	Tomato	plastid	18.55	16.53
Solyc11g069400.1.1	Tomato	plastid	21.04	16.03
Solyc04g049450.2.1	Tomato	endoplasmic reticulum, nucleus, plastid	20.36	15.99
Solyc03g120720.2.1	Tomato	plastid	18.55	15.24
Solyc06g075210.2.1	Tomato	unclear	18.55	14.94
Solyc07g049450.2.1	Tomato	nucleus	13.12	13.43

Protein Annotations

MapMan:18.11.1.3	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0034976
GO:GO:0045454	InterPro:IPR013766	UniProt:K4C7G1	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF137	SUPFAM:SSF52833	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc06g065320.2	EnsemblPlants:Solyc06g065320.2.1	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI00027672BB	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:+:40731996..40737033

Molecular Weight (calculated)

49688.4 Da

IEP (calculated)

4.983

GRAVY (calculated)

-0.154

Length

442 amino acids

Sequence
(BLAST)

001: MMKNMSFVIL LLVLVSRPFI TAAESEQQKQ QLGIDSGKVL ELDESNFDAA ISSFDYILVD FYAPWCGHCK RLAPQLDKAA SILADLKKPI SIAKIDADKY
101: KRVGSKYGID GYPTLKIFMH GVPTEYYGPR KADLLVRFLK KFVAADVAIL NSDSAISEFV EAAGTSFPIF IGFGLNESAI SHFAVKYKKR AWFSVAKDFS
201: DKTMEFYDFD KVPALVARHP NYDEQSIFYG PFEENFVEDY IKQSLLPLTL PITEETLRLL KDDERKVILT ILEDETDDRS KKLLKLLKAA ASANRDFVFV
301: FVGFKQWQGF AESFDVSKKT KLPKMVVWDG DEEYFSVVGS ESVEDEDQGS QITHFIQGYK DGNIIQKRIS SGSFMGFINS MIGLGTVTII VFVVAVVMII
401: QSLKEEPLTV GTRDEGDHPS SSTSQTEARQ PLRSGEKQDK ED

Best Arabidopsis Sequence Match ( AT1G35620.1 )
(BLAST)

001: MRSLKLLLCW ISFLTLSISI SASSDDQFTL DGTVLELTDS NFDSAISTFD CIFVDFYAPW CGHCKRLNPE LDAAAPILAK LKQPIVIAKL NADKYSRLAR
101: KIEIDAFPTL MLYNHGVPME YYGPRKADLL VRYLKKFVAP DVAVLESDST VKEFVEDAGT FFPVFIGFGL NESIISGLGR KYKKKAWFAV SKEVSEDTMV
201: SYDFDKAPAL VANHPTYNEH SVFYGPFEDG FLEEFVKQSF LPLILPINHD TLKLLKDDER KIVLTIVEDE THESLEKLYK ALRAAAHANR DLVFGYVGVK
301: QFEEFVDSFH VDKKTNLPKI VVWDGDEEYD QVTGIETITQ EEDHLTQVSR FLEGYREGRT EKKKINGPSF MGFINSMIGI RSVYILVFLV AVIMMLRSLG
401: QVEEPTGVRT ATAVRERVDQ ATTVPEDESS EHKPSDKKED

Arabidopsis Description

PDIL5-2Protein disulfide-isomerase 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94F09]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.