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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02550 Canola endoplasmic reticulum 94.87 94.87
Bra014319.1-P Field mustard endoplasmic reticulum 71.86 91.53
CDY68572 Canola endoplasmic reticulum 84.03 84.35
CDY52981 Canola endoplasmic reticulum 84.03 83.55
AT1G52260.1 Thale cress endoplasmic reticulum 83.08 81.38
KRH09876 Soybean endoplasmic reticulum 58.37 58.7
PGSC0003DMT400006756 Potato endoplasmic reticulum 59.89 58.55
VIT_09s0002g04250.t01 Wine grape endoplasmic reticulum 59.7 58.47
KRH23443 Soybean endoplasmic reticulum 54.94 58.27
Solyc03g120720.2.1 Tomato plastid 58.94 57.62
GSMUA_Achr10P... Banana endoplasmic reticulum 52.28 50.93
Zm00001d045218_P002 Maize endoplasmic reticulum 49.81 49.53
Os06t0163400-01 Rice plasma membrane 49.05 48.41
TraesCS7D01G121800.1 Wheat endoplasmic reticulum 49.24 47.61
EER87912 Sorghum endoplasmic reticulum 49.24 47.52
TraesCS7A01G123900.1 Wheat endoplasmic reticulum 48.86 47.5
TraesCS7B01G022800.1 Wheat endoplasmic reticulum 49.05 46.49
HORVU7Hr1G026030.1 Barley cytosol 39.16 35.15
CDY09193 Canola endoplasmic reticulum 30.99 27.77
CDX96575 Canola endoplasmic reticulum 25.67 26.95
CDY01314 Canola endoplasmic reticulum 25.29 26.81
CDY53631 Canola endoplasmic reticulum 30.23 26.68
CDX73422 Canola endoplasmic reticulum 29.09 26.56
CDY31525 Canola endoplasmic reticulum 30.04 26.51
CDY38821 Canola cytosol, endoplasmic reticulum 24.9 26.2
CDY56958 Canola endoplasmic reticulum 28.71 26.08
CDY00400 Canola endoplasmic reticulum 24.9 25.99
CDY04673 Canola endoplasmic reticulum 23.76 25.1
CDY38344 Canola endoplasmic reticulum 24.14 24.85
CDY40898 Canola endoplasmic reticulum 23.95 24.71
CDX87514 Canola endoplasmic reticulum 23.76 24.56
CDY08176 Canola endoplasmic reticulum 23.0 24.3
CDX88376 Canola cytosol, endoplasmic reticulum 23.57 24.27
CDX93606 Canola endoplasmic reticulum 6.08 22.22
CDX95112 Canola endoplasmic reticulum 6.08 22.22
CDY53400 Canola endoplasmic reticulum 14.26 22.19
CDX79207 Canola cytosol 4.94 21.49
CDY57723 Canola endoplasmic reticulum 12.93 18.84
CDX80106 Canola endoplasmic reticulum 12.93 18.84
CDX95726 Canola endoplasmic reticulum 12.93 18.78
CDX83326 Canola endoplasmic reticulum 12.55 18.23
CDY18278 Canola endoplasmic reticulum 14.64 17.66
CDY37102 Canola endoplasmic reticulum 14.45 17.47
CDX73337 Canola endoplasmic reticulum 14.07 17.01
CDX79497 Canola endoplasmic reticulum 14.07 16.7
CDY12149 Canola endoplasmic reticulum 13.5 16.03
CDY52544 Canola endoplasmic reticulum 13.5 15.99
CDX95413 Canola cytosol 5.7 12.55
Protein Annotations
Gene3D:3.40.30.10MapMan:50.5.3GO:A0A078IDV2UniProt:A0A078IDV2EnsemblPlants:CDY47529ProteinID:CDY47529
ProteinID:CDY47529.1GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009987GO:GO:0019725
GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00087591001InterPro:IPR013766PFAM:PF00085PFAM:PF13848PFscan:PS51352
PANTHER:PTHR18929PANTHER:PTHR18929:SF121SUPFAM:SSF52833SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domainUniParc:UPI0004EDCC3FSEG:seg:::
Description
BnaC03g69330DBnaC03g69330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDV2]
Coordinates
chrLK032720:+:19230..22174
Molecular Weight (calculated)
58952.3 Da
IEP (calculated)
4.834
GRAVY (calculated)
-0.203
Length
526 amino acids
Sequence
(BLAST)
001: MSMNPKLSVS TFILLLLLTF LLIPSHSSSS DEESDDDLEQ LLEVDEQLQE DRPEHQQSEA ETVSKAQRIV LELSGDNAKR VVDGNEFVLV LGYAPWCARS
101: ADLMPRFSEA ATGLKEIGSP VLMAKIDGDR YGKVASELEI KGFPTLLLFV NGTSQPYTGG FSAEDIVIWV QKKTGSSIIT VNTLDEAQRF LNKYHTFALG
201: LFHKLEGSEY NEFVKAAKSD NEIQFVETSD NDVAKLLFPH LKTNTVFIGL VKTEAERYTV YDGPYKMEKL LEFLGNNKFP LITRLTESNT VWVYSSPVKL
301: QVMIFSKADV FQNLAQSLED LARKFKSKLM LIYVDITNEN LAMPFLTLFG IDHANKTVVA AFDNNLNSKY LLESDPSPSN IEEFCSGLAD GTVSHYYRSE
401: PVPDNENASI VTVVGKTFDE LVLNSHENVL LEVHTPWCVN CEAMSKQVLK LAKHFKGFKN LVFARIDASV NEHAKLQVDD FPTILLYKSG EKEKPLKLST
501: KHSAKDMAVF INEELKPKDG SARDEL
Best Arabidopsis Sequence Match ( AT1G52260.1 )
(BLAST)
001: MSLIPKPISK VSTFTFILLI LLSFTIIIAY SSPDSNVESN EPGFDSDLDQ LLAVDEQLQE DRPEQQSEAE TVSKAQRIVL ELNGDYTKRV IDGNEFVMVL
101: GYAPWCARSA ELMPRFAEAA TALKEIGSSV LMAKIDGDRY SKIASELEIK GFPTLLLFVN GTSLTYNGGS SAEDIVIWVQ KKTGAPIITL NTVDEAPRFL
201: DKYHTFVLGL FEKFEGSEHN EFVKAAKSDD EIQFIETRDS DVAKLLFPDL KSNNVFIGLV KPEAERYTVY DGSYKMEKIL EFLGSNKFPL FTKLTETNTV
301: WVYSSPVKLQ VMLFSKADDF QKLAQPLEDI ARKFKSKLMF IYVDITNENL AMPFLILFGI EAGNKTVVAA FDNNLNSKYL LESDPSPNSI EEFCSGLAHG
401: TVSRYYRSEP VPDNENASIV TVVGKTFDGL VLNSRENVLL EVHTPWCVNC EALSKQIEKL AKHFKGFENL VFARIDASAN EHTKLQVDDK YPIILLYKSG
501: EKEKPLKLST KLSAKDIAVF INEELLKPKN GSAKDEL
Arabidopsis Description
PDIL1-5Protein disulfide isomerase-like 1-5 [Source:UniProtKB/Swiss-Prot;Acc:A3KPF5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.