Factsheet for GSMUA_Achr10P14810_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2
nucleus 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g04250.t01	Wine grape	endoplasmic reticulum	61.11	61.45
Zm00001d045218_P002	Maize	endoplasmic reticulum	60.0	61.25
Os06t0163400-01	Rice	plasma membrane	59.63	60.41
TraesCS7D01G121800.1	Wheat	endoplasmic reticulum	60.0	59.56
TraesCS7A01G123900.1	Wheat	endoplasmic reticulum	59.63	59.52
KRH09876	Soybean	endoplasmic reticulum	57.59	59.46
PGSC0003DMT400006756	Potato	endoplasmic reticulum	59.07	59.29
KRH23443	Soybean	endoplasmic reticulum	54.44	59.27
EER87912	Sorghum	endoplasmic reticulum	59.81	59.27
TraesCS7B01G022800.1	Wheat	endoplasmic reticulum	60.19	58.56
Solyc03g120720.2.1	Tomato	plastid	58.15	58.36
CDY02550	Canola	endoplasmic reticulum	51.48	52.85
CDY47529	Canola	endoplasmic reticulum	50.93	52.28
CDY52981	Canola	endoplasmic reticulum	50.93	51.98
AT1G52260.1	Thale cress	endoplasmic reticulum	51.67	51.96
CDY68572	Canola	endoplasmic reticulum	50.37	51.91
AT3G16110.1	Thale cress	endoplasmic reticulum	51.3	51.87
Bra018958.1-P	Field mustard	endoplasmic reticulum	50.74	51.8
Bra014319.1-P	Field mustard	endoplasmic reticulum	37.96	49.64
HORVU7Hr1G026030.1	Barley	cytosol	47.59	43.86
GSMUA_Achr8P18890_001	Banana	cytosol	27.22	31.61
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum	26.67	31.37
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum	26.85	31.32
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	23.7	25.25
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	22.59	23.74
GSMUA_Achr11P...	Banana	endoplasmic reticulum	12.78	19.06
GSMUA_Achr2P02130_001	Banana	endoplasmic reticulum	12.04	17.96
GSMUA_Achr10P...	Banana	endoplasmic reticulum	5.0	17.76
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	14.44	17.49
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	14.07	17.16
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	13.15	16.47

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	ncoils:Coil	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr10G14810_001	EnsemblPlants:GSMUA_Achr10P14810_001	EnsemblPlants:GSMUA_Achr10T14810_001
InterPro:IPR013766	UniProt:M0RIA7	PFAM:PF00085	PFAM:PF13848	PFscan:PS51352	PANTHER:PTHR18929
PANTHER:PTHR18929:SF121	SUPFAM:SSF52833	SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI00029605B3	SEG:seg	:	:	:	:

Description

Putative Protein disulfide-isomerase [Source:GMGC_GENE;Acc:GSMUA_Achr10G14810_001]

Coordinates

chr10:-:22936998..22945714

Molecular Weight (calculated)

60738.7 Da

IEP (calculated)

4.939

GRAVY (calculated)

-0.207

Length

540 amino acids

Sequence
(BLAST)

001: MATSWRVLRV TLLLFLLVRC LSVASITLID DADDDLEGLE ELLAIDEEEE QKGGGGDGGG APSRSSEAEL LRRAQRIVLE LSNENAKKVV DSNEAVLLLG
101: YTPWCPRSAE LMPRFAEAAT TLREMGSSLV VAKLDAERHA KAASLLGIKG FPTILLFANG TALSYRGGFT KEEIVIWARK KTGVPVIRLS SINDAEEFLR
201: QHQIFIVGLF EKYEGPEHVE FVKAATTDNE IQFVETNDIN IAKVLFPEVG TEKKFIGLVK SEPERYEKFV ENFEEQKILQ FVDYNKFPLV TVLTELNSAR
301: VYSSAIKLQV FIFAAANEFK DLYPLLQDVA RPYKTNIMFV YVDNAEDNLA KPFLTLYGLE AEKPIVTAFD NRIGSKYLLE SDLTRNTLEE FCSGLLHGYL
401: PPYFKSEPIP NEKGLIEKVV GKTFDASVLD SSENIFLEVY TPWCFDCEAT SKQIEKLAKH FKGLENLKFA RIDASSNEHP KLQINNYPTL LFYPARDKSN
501: PIKVSKKSSL KELIAFINKN IRSDDGRGIT DSDHNKKDEL

Best Arabidopsis Sequence Match ( AT3G16110.1 )
(BLAST)

001: MLTKPKPNSK FSILFTFLLL LSFLIFVARS SDVAVEAGSE EELDDLEQLL AVDEQLQEER PEQQSEAETV SKAQRIVVEL NGDNTKRLID GNEYVMVLGY
101: APWCARSAEL MPRFAEAATD LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK TGASTIKLDT VDEASGFLKK
201: HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR
301: VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT
401: VSAYYKSQPI PDNQNASVVA VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE HPKLTVDDYP TILLYKTGEK
501: ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL

Arabidopsis Description

PDIL1-6PDIL1-6 [Source:UniProtKB/TrEMBL;Acc:A0A178VNL8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.