Factsheet for TraesCS7D01G121800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G123900.1	Wheat	endoplasmic reticulum	95.77	96.3
TraesCS7B01G022800.1	Wheat	endoplasmic reticulum	97.61	95.68
Os06t0163400-01	Rice	plasma membrane	80.88	82.55
Zm00001d045218_P002	Maize	endoplasmic reticulum	78.31	80.53
EER87912	Sorghum	endoplasmic reticulum	78.68	78.53
HORVU7Hr1G026030.1	Barley	cytosol	72.43	67.24
GSMUA_Achr10P...	Banana	endoplasmic reticulum	59.56	60.0
VIT_09s0002g04250.t01	Wine grape	endoplasmic reticulum	52.21	52.89
KRH23443	Soybean	endoplasmic reticulum	48.16	52.82
KRH09876	Soybean	endoplasmic reticulum	50.18	52.2
PGSC0003DMT400006756	Potato	endoplasmic reticulum	49.45	50.0
Bra018958.1-P	Field mustard	endoplasmic reticulum	48.35	49.72
CDY52981	Canola	endoplasmic reticulum	48.16	49.53
Solyc03g120720.2.1	Tomato	plastid	48.9	49.44
CDY47529	Canola	endoplasmic reticulum	47.61	49.24
CDY68572	Canola	endoplasmic reticulum	47.06	48.85
CDY02550	Canola	endoplasmic reticulum	47.06	48.67
AT1G52260.1	Thale cress	endoplasmic reticulum	47.61	48.23
AT3G16110.1	Thale cress	endoplasmic reticulum	46.88	47.75
Bra014319.1-P	Field mustard	endoplasmic reticulum	34.74	45.76
TraesCS6D01G005200.1	Wheat	golgi	31.25	28.91
TraesCS6D01G004700.1	Wheat	endoplasmic reticulum	30.88	28.62
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	22.61	23.79
TraesCS6D01G004600.2	Wheat	endoplasmic reticulum	14.71	23.67
TraesCS4D01G098400.1	Wheat	golgi	20.4	21.55
TraesCS6D01G215100.1	Wheat	endoplasmic reticulum	15.07	19.66
TraesCS1D01G106500.1	Wheat	endoplasmic reticulum	12.87	19.07
TraesCS2D01G302900.1	Wheat	endoplasmic reticulum	15.07	18.18
TraesCS5D01G241200.1	Wheat	golgi	13.05	16.14
TraesCS4D01G197000.1	Wheat	endoplasmic reticulum	4.23	15.23

Protein Annotations

EnsemblPlants:TraesCS7D01G121800.1	EnsemblPlantsGene:TraesCS7D01G121800	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	PANTHER:PTHR18929	PANTHER:PTHR18929:SF121
PFAM:PF00085	PFAM:PF13848	PFscan:PS51352	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52833
TIGR:cd02981	TIGR:cd02982	TIGR:cd02995	TMHMM:TMhelix	MapMan:50.5.3	:

Description

No Description!

Coordinates

chr7D:+:75925944..75930227

Molecular Weight (calculated)

59625.1 Da

IEP (calculated)

4.769

GRAVY (calculated)

-0.147

Length

544 amino acids

Sequence
(BLAST)

001: MRATRLLAAA ALLAALLAVS AAAAKLDLDD VDDSEVLEAL LAVDDEEEAA PPGAGAGGGG GAEAVRRTQS MVLVLDNDNA ARAVRDHPEL LLLGYAPWCE
101: RSAKLMPRFA EAAAALRAMG SAVAFAKLDG ERFPKAASAV GVNGFPSVLL FVNGTEHAYT GLHTKDAIVT WVRKKTGTPV IRLESKDSAE EFLKKGHTFA
201: LGLFKNYEGA GHEEFVKAAT AENEVQFVET NDRNVAKILF PGIASEEQFL GLVKSEPEKF EKFDGAFEEK EILQFVELNK FPLITAFTDL NSAKVYSSPI
301: KLQVFTFAEA YDFEDLESIV QEVARGFKTK IMFIYVDTAE ENLAKPFLTL YGLEGDKPTV TAFDTSKGTK YLLEADINEK NLKEFSLSLL DGTLPPYFRS
401: EPVPQEKGLV EKVVGRTFDS SVLQSPHNVL LEAHAPWCVD CEAISKNIEK LAKHFSGLDN LKFARIDASV NEHPKLQVNN YPTLLLYPAE DKTNPIKLSK
501: KLSLKDMARF VKEKLQISDV EIKEKLQTSD VETVAAADNV KDEL

Best Arabidopsis Sequence Match ( AT3G16110.1 )
(BLAST)

001: MLTKPKPNSK FSILFTFLLL LSFLIFVARS SDVAVEAGSE EELDDLEQLL AVDEQLQEER PEQQSEAETV SKAQRIVVEL NGDNTKRLID GNEYVMVLGY
101: APWCARSAEL MPRFAEAATD LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK TGASTIKLDT VDEASGFLKK
201: HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR
301: VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT
401: VSAYYKSQPI PDNQNASVVA VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE HPKLTVDDYP TILLYKTGEK
501: ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL

Arabidopsis Description

PDIL1-6PDIL1-6 [Source:UniProtKB/TrEMBL;Acc:A0A178VNL8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.