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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018958.1-P Field mustard endoplasmic reticulum 98.3 98.3
CDY68572 Canola endoplasmic reticulum 94.14 95.04
CDY47529 Canola endoplasmic reticulum 83.55 84.03
CDY02550 Canola endoplasmic reticulum 82.61 83.08
AT1G52260.1 Thale cress endoplasmic reticulum 80.91 79.7
KRH09876 Soybean endoplasmic reticulum 57.84 58.51
PGSC0003DMT400006756 Potato endoplasmic reticulum 58.98 57.99
KRH23443 Soybean endoplasmic reticulum 54.25 57.86
VIT_09s0002g04250.t01 Wine grape endoplasmic reticulum 58.22 57.36
Solyc03g120720.2.1 Tomato plastid 58.03 57.06
GSMUA_Achr10P... Banana endoplasmic reticulum 51.98 50.93
Zm00001d045218_P002 Maize endoplasmic reticulum 50.47 50.47
Os06t0163400-01 Rice plasma membrane 49.72 49.34
TraesCS7D01G121800.1 Wheat endoplasmic reticulum 49.53 48.16
TraesCS7A01G123900.1 Wheat endoplasmic reticulum 49.15 48.06
EER87912 Sorghum endoplasmic reticulum 49.34 47.89
TraesCS7B01G022800.1 Wheat endoplasmic reticulum 49.34 47.03
HORVU7Hr1G026030.1 Barley cytosol 38.94 35.15
CDY09193 Canola endoplasmic reticulum 31.0 27.94
CDY56958 Canola endoplasmic reticulum 29.87 27.29
CDX73422 Canola endoplasmic reticulum 29.68 27.26
CDX96575 Canola endoplasmic reticulum 25.33 26.75
CDY53631 Canola endoplasmic reticulum 30.06 26.68
CDY31525 Canola endoplasmic reticulum 29.68 26.34
CDY01314 Canola endoplasmic reticulum 24.57 26.21
CDY38821 Canola cytosol, endoplasmic reticulum 24.76 26.2
CDY00400 Canola endoplasmic reticulum 24.57 25.79
CDX95112 Canola endoplasmic reticulum 6.62 24.31
CDY04673 Canola endoplasmic reticulum 22.87 24.3
CDY38344 Canola endoplasmic reticulum 23.44 24.27
CDY40898 Canola endoplasmic reticulum 23.06 23.92
CDX87514 Canola endoplasmic reticulum 22.87 23.77
CDY08176 Canola endoplasmic reticulum 22.31 23.69
CDX93606 Canola endoplasmic reticulum 6.43 23.61
CDX88376 Canola cytosol, endoplasmic reticulum 22.68 23.48
CDY53400 Canola endoplasmic reticulum 13.42 21.01
CDX79207 Canola cytosol 4.73 20.66
CDY57723 Canola endoplasmic reticulum 13.61 19.94
CDX95726 Canola endoplasmic reticulum 13.61 19.89
CDX80106 Canola endoplasmic reticulum 13.42 19.67
CDX83326 Canola endoplasmic reticulum 13.23 19.34
CDY18278 Canola endoplasmic reticulum 13.8 16.74
CDY37102 Canola endoplasmic reticulum 13.42 16.32
CDX79497 Canola endoplasmic reticulum 13.61 16.25
CDX73337 Canola endoplasmic reticulum 13.23 16.09
CDY52544 Canola endoplasmic reticulum 13.04 15.54
CDY12149 Canola endoplasmic reticulum 12.85 15.35
CDX95413 Canola cytosol 5.86 12.97
Protein Annotations
Gene3D:3.40.30.10MapMan:50.5.3GO:A0A078IT49UniProt:A0A078IT49EnsemblPlants:CDY52981ProteinID:CDY52981
ProteinID:CDY52981.1GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009987GO:GO:0019725
GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00008259001InterPro:IPR013766PFAM:PF00085PFAM:PF13848PFscan:PS51352
PANTHER:PTHR18929PANTHER:PTHR18929:SF121SUPFAM:SSF52833SignalP:SignalP-noTMInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domain
UniParc:UPI0004EE1C05SEG:seg::::
Description
BnaA06g01660DBnaA06g01660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT49]
Coordinates
chrLK033147:-:66253..69398
Molecular Weight (calculated)
59085.4 Da
IEP (calculated)
4.882
GRAVY (calculated)
-0.219
Length
529 amino acids
Sequence
(BLAST)
001: MSINPKPQSS LLTFILLLLL TSAAYSSSNH PGSDEESDDL EQLLAVDEQL QQDLPPHHHQ SEAETVSRAQ RIVLELSGDN ARRVVGGNEF VMVLGYAPWC
101: ARSADLMPKF SEAATALKEI GSPVVMAKID GDRYGKVASE MEIKGFPTLL LFVNGTSKAY TGGFSAEEIV IWVQKKTGAP IVTVNTVDEA ERFLKKYHTF
201: VVGLFNKFEG SEYNEFVKAA KSDDEIQFVE TSDSEVAKLL FPEIKTSDVF IGMVKTEAER YTSYAGSYKM ENILEFLSKN KFPLITKLSE SNTAWVYSSP
301: VKLQVMIFAK ADDFQNMAQP LEDFARKFKS KLMFIYIDIT NENLAMPFLT LFGIEHANKT VVAAFDNKLN SKYLLESDPS RGNIEDFCSG LADGTIQQYY
401: RSEPVPDNEN ASIVTVVGKT FDELVLNSQE NVLLEVHTPW CVNCEAMSKQ VVKLAKHFKG FENLVFARID ASTNEHAKLQ VNDYPTIFLY KSGEKEKPLK
501: ISTKLSAKDM AVFINEELKP RGGSAKDEL
Best Arabidopsis Sequence Match ( AT1G52260.1 )
(BLAST)
001: MSLIPKPISK VSTFTFILLI LLSFTIIIAY SSPDSNVESN EPGFDSDLDQ LLAVDEQLQE DRPEQQSEAE TVSKAQRIVL ELNGDYTKRV IDGNEFVMVL
101: GYAPWCARSA ELMPRFAEAA TALKEIGSSV LMAKIDGDRY SKIASELEIK GFPTLLLFVN GTSLTYNGGS SAEDIVIWVQ KKTGAPIITL NTVDEAPRFL
201: DKYHTFVLGL FEKFEGSEHN EFVKAAKSDD EIQFIETRDS DVAKLLFPDL KSNNVFIGLV KPEAERYTVY DGSYKMEKIL EFLGSNKFPL FTKLTETNTV
301: WVYSSPVKLQ VMLFSKADDF QKLAQPLEDI ARKFKSKLMF IYVDITNENL AMPFLILFGI EAGNKTVVAA FDNNLNSKYL LESDPSPNSI EEFCSGLAHG
401: TVSRYYRSEP VPDNENASIV TVVGKTFDGL VLNSRENVLL EVHTPWCVNC EALSKQIEKL AKHFKGFENL VFARIDASAN EHTKLQVDDK YPIILLYKSG
501: EKEKPLKLST KLSAKDIAVF INEELLKPKN GSAKDEL
Arabidopsis Description
PDIL1-5Protein disulfide isomerase-like 1-5 [Source:UniProtKB/Swiss-Prot;Acc:A3KPF5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.