Factsheet for GSMUA_Achr3P22070_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 10
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P09800_001
GSMUA_Achr1P15920_001
GSMUA_Achr3P01000_001
GSMUA_Achr4P06140_001
GSMUA_Achr4P12910_001
GSMUA_Achr8P03350_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	GSMUA_Achr10P...	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr1P09800_001	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr1P15920_001	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr3P01000_001	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr4P06140_001	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr4P12910_001	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr8P03350_001	AT1G47128.1	18676877
AT1G21750.1	GSMUA_AchrUn_...	AT1G47128.1	18676877
AT1G21750.1	GSMUA_Achr10P...	AT5G43060.1	18676877
AT1G21750.1	GSMUA_Achr1P09800_001	AT5G43060.1	18676877
AT1G21750.1	GSMUA_Achr1P15920_001	AT5G43060.1	18676877
AT1G21750.1	GSMUA_Achr3P01000_001	AT5G43060.1	18676877
AT1G21750.1	GSMUA_Achr4P06140_001	AT5G43060.1	18676877
AT1G21750.1	GSMUA_Achr4P12910_001	AT5G43060.1	18676877
AT1G21750.1	GSMUA_Achr8P03350_001	AT5G43060.1	18676877
AT1G21750.1	GSMUA_AchrUn_...	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	72.76	73.77
Solyc06g060290.2.1	Tomato	plastid	53.11	62.33
PGSC0003DMT400045299	Potato	endoplasmic reticulum	59.53	61.57
Os11t0199200-01	Rice	extracellular, plasma membrane	58.37	58.59
Zm00001d028108_P001	Maize	mitochondrion	15.95	58.57
PGSC0003DMT400010624	Potato	endoplasmic reticulum	56.03	58.3
Bra012293.1-P	Field mustard	endoplasmic reticulum	56.23	58.27
HORVU4Hr1G049820.1	Barley	cytosol	20.62	58.24
Bra016405.1-P	Field mustard	endoplasmic reticulum	56.03	57.48
AT1G21750.1	Thale cress	endoplasmic reticulum	55.64	57.09
TraesCS4B01G101800.3	Wheat	golgi	56.61	56.84
TraesCS4D01G098400.1	Wheat	golgi	56.61	56.5
TraesCS4A01G214200.2	Wheat	plastid	56.23	56.12
Bra017948.1-P	Field mustard	endoplasmic reticulum	54.09	55.82
KXG28001	Sorghum	endoplasmic reticulum	55.84	55.73
AT1G77510.1	Thale cress	endoplasmic reticulum	54.86	55.51
Bra015665.1-P	Field mustard	endoplasmic reticulum	54.47	55.01
PGSC0003DMT400060279	Potato	cytosol	19.26	54.4
Bra008311.1-P	Field mustard	endoplasmic reticulum	53.31	53.62
Solyc05g056400.2.1	Tomato	plastid	54.47	52.93
Solyc06g005940.2.1	Tomato	nucleus, plastid	50.78	52.3
HORVU4Hr1G043910.1	Barley	extracellular	56.03	51.43
Zm00001d007301_P001	Maize	endoplasmic reticulum	54.86	51.37
PGSC0003DMT400036388	Potato	endoplasmic reticulum	48.83	51.33
Zm00001d049099_P005	Maize	endoplasmic reticulum	51.17	49.44
Solyc05g018700.2.1	Tomato	plastid	46.69	48.39
HORVU4Hr1G049880.2	Barley	mitochondrion, plastid	24.9	43.69
Zm00001d016017_P002	Maize	cytosol	20.04	40.39
Zm00001d041417_P001	Maize	endoplasmic reticulum	15.95	37.1
Zm00001d035557_P001	Maize	mitochondrion	24.32	36.44
GSMUA_Achr8P18890_001	Banana	cytosol	27.24	30.11
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum	26.85	29.81
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum	25.49	28.54
GSMUA_Achr2P02130_001	Banana	endoplasmic reticulum	19.07	27.07
GSMUA_Achr11P...	Banana	endoplasmic reticulum	19.07	27.07
GSMUA_Achr10P...	Banana	endoplasmic reticulum	7.78	26.32
GSMUA_Achr5P17020_001	Banana	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	19.84	22.87
GSMUA_Achr10P...	Banana	endoplasmic reticulum	23.74	22.59
GSMUA_Achr7P12170_001	Banana	endoplasmic reticulum	18.29	21.81
GSMUA_Achr3P19080_001	Banana	endoplasmic reticulum, golgi, plasma membrane	18.48	21.44

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	InterPro:Disulphide_isomerase	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150
GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSMUA_Achr3G22070_001	EnsemblPlants:GSMUA_Achr3P22070_001
EnsemblPlants:GSMUA_Achr3T22070_001	InterPro:IPR013766	UniProt:M0SGS3	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI000295F87F	SEG:seg	:	:	:	:

Description

Protein disulfide-isomerase [Source:GMGC_GENE;Acc:GSMUA_Achr3G22070_001]

Coordinates

chr3:+:22955657..22962584

Molecular Weight (calculated)

57318.5 Da

IEP (calculated)

4.412

GRAVY (calculated)

-0.276

Length

514 amino acids

Sequence
(BLAST)

001: MAISSSWITA AFLALLVLSS SLPPSAAEGN DGEVKEPDTD PEAVAEPSFV ITLDASNFSE TVSKHDFIVV EFYAPWCGHC KKLAPEYEKA ALVLSENDPP
101: IALAKIDCNE NVNKEIASKY EVRGFPTLKI FRNGGEDIQE YKGPREADGI VEYLSKQVGP ASTEIKSTED VDKVIVDKKI SIVGIFPQFS GEEFETFIKV
201: AEKLRSDYDF GHTSNAKLLP HGDETVKQPI VRLFKPFDEL FVDFKDFQAD AIEKFIESES MPIVTTYDND PTNHPFLVKF FDSPNAKAML FFNFSSDNYN
301: TFKSKLHEVA KDYKGDNIKF LIGDLDASEM ALKFFGLEKD QAPLIIIQDS KGHKYFQPNV TPEQIATWLK DYAVGGLEPY RKSESVPEVN NEPVKIVVAK
401: SLQEIVFSSG KNVLLEFYAP WCGHCKKLAP ILEEVAISFE NDADVIIAKM DATKNDVPDE FAVQGYPTLY FVSASGKISQ YEGNRTVEDF INFVNNNKDV
501: ISQPGSPDSV KDEL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.