CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
EES11628
EES13064
KXG27269
OQU78269

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	KXG27269	AT1G47128.1	18676877
AT1G21750.1	EES11628	AT3G19390.1	18676877
AT1G21750.1	EES13064	AT3G19390.1	18676877
AT1G21750.1	EES11628	AT3G19400.1	18676877
AT1G21750.1	EES13064	AT3G19400.1	18676877
AT1G21750.1	OQU78269	AT5G42980.1	15352244
AT1G21750.1	KXG27269	AT5G43060.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0199200-01	Rice	extracellular, plasma membrane	82.72	83.2
TraesCS4B01G101800.3	Wheat	golgi	79.03	79.49
TraesCS4D01G098400.1	Wheat	golgi	79.42	79.42
TraesCS4A01G214200.2	Wheat	plastid	78.83	78.83
Zm00001d049099_P005	Maize	endoplasmic reticulum	78.06	75.56
HORVU4Hr1G043910.1	Barley	extracellular	77.86	71.61
Solyc06g060290.2.1	Tomato	plastid	51.65	60.73
GSMUA_Achr1P16970_001	Banana	endoplasmic reticulum	59.03	59.96
PGSC0003DMT400045299	Potato	endoplasmic reticulum	56.7	58.75
Bra016405.1-P	Field mustard	endoplasmic reticulum	56.31	57.88
Bra012293.1-P	Field mustard	endoplasmic reticulum	54.17	56.25
PGSC0003DMT400010624	Potato	endoplasmic reticulum	53.59	55.87
GSMUA_Achr3P22070_001	Banana	endoplasmic reticulum	55.73	55.84
AT1G21750.1	Thale cress	endoplasmic reticulum	54.17	55.69
AT1G77510.1	Thale cress	endoplasmic reticulum	54.76	55.51
KXG26345	Sorghum	endoplasmic reticulum	55.15	54.83
Bra015665.1-P	Field mustard	endoplasmic reticulum	53.2	53.83
Bra017948.1-P	Field mustard	endoplasmic reticulum	51.65	53.41
Bra008311.1-P	Field mustard	endoplasmic reticulum	52.04	52.45
Solyc06g005940.2.1	Tomato	nucleus, plastid	49.9	51.5
Solyc05g056400.2.1	Tomato	plastid	50.68	49.34
PGSC0003DMT400060279	Potato	cytosol	16.89	47.8
PGSC0003DMT400036388	Potato	endoplasmic reticulum	45.05	47.44
Solyc05g018700.2.1	Tomato	plastid	43.69	45.36
EES06089	Sorghum	endoplasmic reticulum	30.49	27.45
EES00714	Sorghum	endoplasmic reticulum	19.61	27.45
EES19066	Sorghum	endoplasmic reticulum	19.03	26.7
EER92421	Sorghum	endoplasmic reticulum	7.77	26.67
EER96832	Sorghum	endoplasmic reticulum	19.42	22.78
EES12182	Sorghum	endoplasmic reticulum	17.86	22.01
EER87912	Sorghum	endoplasmic reticulum	22.52	21.28
OQU85098	Sorghum	endoplasmic reticulum	18.64	19.59

Protein Annotations

Gene3D:3.40.30.10	MapMan:50.5.3	UniProt:A0A1B6PQR2	InterPro:Disulphide_isomerase	GO:GO:0000003	GO:GO:0003674
GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005788	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009960
GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0034975	GO:GO:0045454	InterPro:IPR013766
EnsemblPlants:KXG28001	ProteinID:KXG28001	ProteinID:KXG28001.1	PFAM:PF00085	PFAM:PF13848	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase	EnsemblPlantsGene:SORBI_3005G074400
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01126	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI0002207293	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:9023581..9027052

Molecular Weight (calculated)

57313.8 Da

IEP (calculated)

4.703

GRAVY (calculated)

-0.303

Length

515 amino acids

Sequence
(BLAST)

001: MAIRSSKACW ISLLLALALS AVARAEEPAA EGAAEAVLTL DVDSFDEAVA KHPFMVVEFY APWCGHCKKL APEYETAAKE LSKHDPPIVL AKVDANEEKN
101: RPLATKYEIQ GFPTLKIFRN QGKNIQEYKG PREADGIVDY LKKQVGPASK ELKSQEDVAT HYDDKNIYIV GVFTEFSGTE FTNFMEVAEK LRSDYDFGHT
201: LHANHLPRGD AAVERPLVRV LKPFDELVVD TKDFDVAALL KFIDATTVPR VVTFDKNPDN HPYLMKFFQS SAPKAMLFLN FSTGPFDSFK SVYYAAAEEF
301: QNKEIKFLIG DLESSQGALQ YFGLKEDQAP LILIQDGDSK KFLKDQIEAD QIVSWLKEYF DGKLTPFKKS EPIPEVNNEP VKVVVADNIH DFVFKSGKNV
401: LIEFYAPWCG HCKKLAPILE EAATTLQSDE EVVIAKMDAT ANDVPSEFEV QGYPTMYFVT PSGKVTAYDS GRTADDIVDF IKKSKETAGA TQATTTTSEK
501: AADAAEKAEP VKDEL

Best Arabidopsis Sequence Match ( AT1G77510.1 )
(BLAST)

001: MAFKGFACFS ILLLLSLFVS SIRSEETKEF VLTLDHSNFT ETISKHDFIV VEFYAPWCGH CQKLAPEYEK AASELSSHNP PLALAKIDAS EEANKEFANE
101: YKIQGFPTLK ILRNGGKSVQ DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA LAEKLRADYD FAHTLDAKFL
201: PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF
301: LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP
401: WCGHCQKLAP ILDEVALSFQ NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE KKPTSHGEES TKSEEPKKTE
501: ETAAKDEL

Arabidopsis Description

PDIL1-2Protein disulfide isomerase-like 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRG3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.