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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 9
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037590_P002 Maize endoplasmic reticulum 93.73 91.01
Os05t0156300-01 Rice plasma membrane 86.92 86.92
TraesCS1D01G106500.1 Wheat endoplasmic reticulum 84.2 84.2
TraesCS1B01G126100.1 Wheat endoplasmic reticulum 84.2 84.2
TraesCS1A01G097700.1 Wheat golgi 84.2 84.2
EES00714 Sorghum endoplasmic reticulum 81.74 81.52
HORVU1Hr1G022810.1 Barley endoplasmic reticulum 83.65 76.18
GSMUA_Achr2P02130_001 Banana endoplasmic reticulum 73.84 74.86
GSMUA_Achr11P... Banana endoplasmic reticulum 73.57 74.59
Solyc01g100320.2.1 Tomato extracellular 72.75 74.37
PGSC0003DMT400007185 Potato endoplasmic reticulum 71.93 73.54
Bra004455.1-P Field mustard endoplasmic reticulum 70.84 72.02
CDX80106 Canola endoplasmic reticulum 70.84 72.02
Bra000454.1-P Field mustard endoplasmic reticulum 70.84 71.82
AT2G47470.1 Thale cress endoplasmic reticulum 70.57 71.75
CDY57723 Canola endoplasmic reticulum 70.57 71.75
CDX83326 Canola endoplasmic reticulum 70.57 71.55
KRH31823 Soybean endoplasmic reticulum 70.84 71.43
KRH69241 Soybean endoplasmic reticulum 16.35 71.43
CDX95726 Canola endoplasmic reticulum 70.3 71.27
KRH69242 Soybean cytosol 55.04 71.13
KRH68449 Soybean endoplasmic reticulum 69.21 70.17
Zm00001d009651_P001 Maize endoplasmic reticulum 37.6 67.65
KRG96732 Soybean endoplasmic reticulum 66.21 63.61
Zm00001d015747_P022 Maize plastid 59.4 63.56
KRH54865 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 54.5 63.09
Zm00001d024894_P016 Maize plastid 58.86 62.97
CDX95413 Canola cytosol 37.87 58.16
EER92421 Sorghum endoplasmic reticulum 14.17 34.67
EER96832 Sorghum endoplasmic reticulum 28.34 23.69
KXG28001 Sorghum endoplasmic reticulum 26.7 19.03
KXG26345 Sorghum endoplasmic reticulum 25.89 18.34
EES06089 Sorghum endoplasmic reticulum 26.7 17.13
EES12182 Sorghum endoplasmic reticulum 15.8 13.88
OQU85098 Sorghum endoplasmic reticulum 16.62 12.45
EER87912 Sorghum endoplasmic reticulum 16.62 11.19
Protein Annotations
Gene3D:1.20.1150.12Gene3D:3.40.30.10MapMan:35.1EntrezGene:8076014UniProt:C5Z0K4InterPro:Disulphide_isomerase
EnsemblPlants:EES19066ProteinID:EES19066ProteinID:EES19066.1InterPro:ERp29_CInterPro:ERp29_C_sfGO:GO:0003674
GO:GO:0003756GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987GO:GO:0016853
GO:GO:0019725GO:GO:0034976GO:GO:0045454InterPro:IPR013766InterPro:IPR036356PFAM:PF00085
PFAM:PF07749PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR18929PANTHER:PTHR18929:SF187
EnsemblPlantsGene:SORBI_3009G051600SUPFAM:SSF47933SUPFAM:SSF52833unigene:Sbi.3770SignalP:SignalP-noTMTIGRFAMs:TIGR01126
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI0001A88CF3RefSeq:XP_002440636.1SEG:seg
Description
hypothetical protein
Coordinates
chr9:-:5234607..5239449
Molecular Weight (calculated)
39937.6 Da
IEP (calculated)
6.864
GRAVY (calculated)
-0.248
Length
367 amino acids
Sequence
(BLAST)
001: MASPQISRRA LGLLLVLATA AAAVVSPAAA DDVVALTEAD FEKEVGQDRG ALVEFYAPWC GHCKKLAPEY EKLGASFKKA KSVLIAKVDC DEHKGLCSKY
101: GVSGYPTIQW FPKGSLEPKK YEGQRSVEAL AEYVNSEAGT NVKIVAIPSS VVVLTPETFD SIVLDETKDV LVEFYAPWCG HCKHLAPVYE KLASVFKQDD
201: GVVIANLDAD KHTDLAEKYG VSGFPTLKFF PKGNKAGEDY DGGRDLDDFV KFINEKCGTS RDSKGQLNSE AGLVASLNPL VKEFLNAAAD KRKEVISKIE
301: EDVAKLSGSA AKHGKIYVTA AKKIMDKGSD YTKKETERLH RLLEKSISPS KADEFIIKKN ILSTFSS
Best Arabidopsis Sequence Match ( AT2G47470.1 )
(BLAST)
001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S
Arabidopsis Description
PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.