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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 8
  • extracellular 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
 plasma membrane: 19658398
nucleus: 21132161
mitochondrion: 25806999
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
nucleus: 28499913
msms PMID: 25806999 doi
AH Kamal, S Komatsu
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba 305-8518, Japan.
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 19658398 doi
S Komatsu, T Wada, Y Abaléa, MZ Nouri, Y Nanjo, N Nakayama, S Shimamura, R Yamamoto, T Nakamura, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH69241 Soybean endoplasmic reticulum 21.98 95.24
KRH69242 Soybean cytosol 72.8 93.31
KRH54865 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 72.53 83.28
GSMUA_Achr11P... Banana endoplasmic reticulum 79.12 79.56
Solyc01g100320.2.1 Tomato extracellular 77.47 78.55
GSMUA_Achr2P02130_001 Banana endoplasmic reticulum 77.75 78.18
PGSC0003DMT400007185 Potato endoplasmic reticulum 76.37 77.44
AT2G47470.1 Thale cress endoplasmic reticulum 76.65 77.29
Bra000454.1-P Field mustard endoplasmic reticulum 75.55 75.97
CDX83326 Canola endoplasmic reticulum 75.27 75.69
CDX95726 Canola endoplasmic reticulum 75.27 75.69
KRH68449 Soybean endoplasmic reticulum 75.0 75.41
CDY57723 Canola endoplasmic reticulum 74.73 75.35
Bra004455.1-P Field mustard endoplasmic reticulum 74.18 74.79
CDX80106 Canola endoplasmic reticulum 74.18 74.79
Zm00001d040766_P001 Maize plasma membrane 73.9 73.3
EES00714 Sorghum endoplasmic reticulum 73.35 72.55
Os05t0156300-01 Rice plasma membrane 72.8 72.21
EES19066 Sorghum endoplasmic reticulum 71.43 70.84
TraesCS1A01G097700.1 Wheat golgi 71.15 70.57
TraesCS1B01G126100.1 Wheat endoplasmic reticulum 71.15 70.57
TraesCS1D01G106500.1 Wheat endoplasmic reticulum 71.15 70.57
Os01t0339900-01 Rice plasma membrane 70.6 69.27
Zm00001d037590_P002 Maize endoplasmic reticulum 70.6 67.99
KRG96732 Soybean endoplasmic reticulum 70.88 67.54
HORVU1Hr1G022810.1 Barley endoplasmic reticulum 71.98 65.01
CDX95413 Canola cytosol 41.48 63.18
Zm00001d009651_P001 Maize endoplasmic reticulum 30.49 54.41
Zm00001d024894_P016 Maize plastid 43.68 46.36
Zm00001d015747_P022 Maize plastid 43.41 46.06
KRH10410 Soybean endoplasmic reticulum 12.64 32.62
KRH22935 Soybean endoplasmic reticulum 12.09 29.93
KRH73319 Soybean endoplasmic reticulum 28.02 23.29
KRH14820 Soybean endoplasmic reticulum 27.75 23.06
KRH53259 Soybean endoplasmic reticulum 27.75 20.08
KRH64644 Soybean nucleus 28.57 19.81
KRH53258 Soybean mitochondrion 21.43 19.8
KRH18702 Soybean endoplasmic reticulum 26.37 19.39
KRH22896 Soybean endoplasmic reticulum 28.85 18.82
KRH16370 Soybean endoplasmic reticulum 25.55 18.75
KRH29922 Soybean endoplasmic reticulum 29.67 18.43
KRH24870 Soybean endoplasmic reticulum 29.12 18.31
KRH26418 Soybean endoplasmic reticulum 27.47 16.61
KRH34995 Soybean endoplasmic reticulum 18.68 15.7
KRH23443 Soybean endoplasmic reticulum 18.41 13.51
KRH09876 Soybean endoplasmic reticulum 19.23 13.38
KRH64647 Soybean cytosol, mitochondrion 7.69 13.21
Protein Annotations
Gene3D:1.20.1150.12EntrezGene:100037470Gene3D:3.40.30.10MapMan:35.1EMBL:AB182629EMBL:ACUP02006087
InterPro:Disulphide_isomeraseInterPro:ERp29_CInterPro:ERp29_C_sfEnsemblPlantsGene:GLYMA_10G014700GO:GO:0003674GO:GO:0003756
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987GO:GO:0016853GO:GO:0019725
GO:GO:0034976GO:GO:0045454UniProt:I1L7R5InterPro:IPR013766InterPro:IPR036356EnsemblPlants:KRH31823
ProteinID:KRH31823ProteinID:KRH31823.1PFAM:PF00085PFAM:PF07749PRINTS:PR00421ScanProsite:PS00194
PFscan:PS51352PANTHER:PTHR18929PANTHER:PTHR18929:SF187SUPFAM:SSF47933SUPFAM:SSF52833SignalP:SignalP-noTM
TIGRFAMs:TIGR01126InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI00003B336DSEG:seg
Description
hypothetical protein
Coordinates
chr10:+:1313154..1318059
Molecular Weight (calculated)
40357.8 Da
IEP (calculated)
5.632
GRAVY (calculated)
-0.361
Length
364 amino acids
Sequence
(BLAST)
001: MEKYQIWSRR IALAAFAFAL LFQSASADDV VVLSEDNFEK EVGQDRGALV EFYAPWCGHC KKLAPEYEKL GSSFKKAKSV LIGKVDCDEH KSLCSKYGVS
101: GYPTIQWFPK GSLEAKKYEG PRTAESLVEF VNTEGGTNVK IATVPSNVVV LTPENFNEVV LDEAKDVLVE FYAPWCGHCK SLAPTYEKVA TAFKLEEDVV
201: IANLDADKYR DLAEKYDVSG FPTLKFFPKG NKAGEDYGGG RDLDDFVAFI NEKSGASRDG KGQLTSQAGI VESLDVLVKE FVAASDEEKK SVFTRLEEEV
301: VKLKGSASRY GKIYLKAAKN YREKGSDYAK NEIQRLQRIL DKSISPAKAD ELTLKKNILS TYAA
Best Arabidopsis Sequence Match ( AT2G47470.1 )
(BLAST)
001: MAKSQIWFGF ALLALLLVSA VADDVVVLTD DSFEKEVGKD KGALVEFYAP WCGHCKKLAP EYEKLGASFK KAKSVLIAKV DCDEQKSVCT KYGVSGYPTI
101: QWFPKGSLEP QKYEGPRNAE ALAEYVNKEG GTNVKLAAVP QNVVVLTPDN FDEIVLDQNK DVLVEFYAPW CGHCKSLAPT YEKVATVFKQ EEGVVIANLD
201: ADAHKALGEK YGVSGFPTLK FFPKDNKAGH DYDGGRDLDD FVSFINEKSG TSRDSKGQLT SKAGIVESLD ALVKELVAAS EDEKKAVLSR IEEEASTLKG
301: STTRYGKLYL KLAKSYIEKG SDYASKETER LGRVLGKSIS PVKADELTLK RNILTTFVAS S
Arabidopsis Description
PDIL2-1UNE5 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.