CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53258	Soybean	mitochondrion	82.55	44.42
CDX79207	Canola	cytosol	21.23	37.19
KRH64644	Soybean	nucleus	73.11	29.52
KRH16370	Soybean	endoplasmic reticulum	68.4	29.23
KRH53259	Soybean	endoplasmic reticulum	68.4	28.83
KRH18702	Soybean	endoplasmic reticulum	66.04	28.28
KXG26345	Sorghum	endoplasmic reticulum	49.06	20.08
TraesCS2A01G306500.1	Wheat	endoplasmic reticulum	48.58	19.92
TraesCS2B01G323200.1	Wheat	endoplasmic reticulum	48.11	19.69
TraesCS2D01G305000.1	Wheat	endoplasmic reticulum	47.64	19.54
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	44.34	18.8
Os02t0554900-01	Rice	plastid	45.75	17.8
KRH22896	Soybean	endoplasmic reticulum	25.94	9.86
KRH29922	Soybean	endoplasmic reticulum	26.42	9.56
KRH69242	Soybean	cytosol	12.74	9.51
KRH24870	Soybean	endoplasmic reticulum	25.94	9.5
KRH26418	Soybean	endoplasmic reticulum	25.47	8.97
KRH09876	Soybean	endoplasmic reticulum	21.23	8.6
KRH54865	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	12.74	8.52
KRG96732	Soybean	endoplasmic reticulum	14.62	8.12
KRH23443	Soybean	endoplasmic reticulum	18.87	8.06
KRH68449	Soybean	endoplasmic reticulum	13.68	8.01
KRH31823	Soybean	endoplasmic reticulum	13.21	7.69
KRH14820	Soybean	endoplasmic reticulum	12.74	6.16
KRH73319	Soybean	endoplasmic reticulum	12.26	5.94
KRH34995	Soybean	endoplasmic reticulum	8.02	3.93
Os04t0436300-01	Rice	endoplasmic reticulum	4.25	3.07
KRH10410	Soybean	endoplasmic reticulum	1.42	2.13
KRH22935	Soybean	endoplasmic reticulum	1.42	2.04
KRH69241	Soybean	endoplasmic reticulum	0.47	1.19
HORVU2Hr1G076360.1	Barley	endoplasmic reticulum	2.36	0.96

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A0R0KCB6	EMBL:ACUP02002770	EnsemblPlantsGene:GLYMA_04G248000	GO:GO:0003674
GO:GO:0003756	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0034976	GO:GO:0045454	InterPro:IPR013766	EnsemblPlants:KRH64647	ProteinID:KRH64647	ProteinID:KRH64647.1
PFAM:PF00085	PFAM:PF13848	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0006ED56C3	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:51516552..51518327

Molecular Weight (calculated)

24086.5 Da

IEP (calculated)

5.153

GRAVY (calculated)

-0.417

Length

212 amino acids

Sequence
(BLAST)

001: MLFINFTAEG AGFFKSRYRE AAEQYRQQGL RFLVGDAKST KGSFQYFGVK EGQVPLIIVQ RNDGKKFLKP NLEPDHISTW LKACKEENIV PYFKSEPISE
101: DNNEPVKVVV GDSIQDIVFN SGKNVIFCWS FILPGVLSYQ SDADVIIAKL DGIANYIPRE TFEVISYPTV YFTSASGKIS QYDGNRTKED IIEFIEKNRD
201: KPAQQEQGKN EL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.