Factsheet for Os02t0554900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 4
cytosol 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plastid: 27126603

msms PMID: 27126603 doi

Y Wang, K Ji, S Shen, H Chen

Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. Electronic address: chenh@ibcas.ac.cn., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0670200-02
Os04t0670500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21750.1	Os04t0670200-02	AT3G19390.1	18676877
AT1G21750.1	Os04t0670500-01	AT3G19390.1	18676877
AT1G21750.1	Os04t0670200-02	AT3G19400.1	18676877
AT1G21750.1	Os04t0670500-01	AT3G19400.1	18676877

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g060290.2.1	Tomato	plastid	45.87	57.08
Bra016405.1-P	Field mustard	endoplasmic reticulum	52.11	56.69
Os11t0199200-01	Rice	extracellular, plasma membrane	52.66	56.05
PGSC0003DMT400045299	Potato	endoplasmic reticulum	51.01	55.94
Os04t0436300-01	Rice	endoplasmic reticulum	29.91	55.63
AT1G21750.1	Thale cress	endoplasmic reticulum	50.28	54.69
Bra012293.1-P	Field mustard	endoplasmic reticulum	49.36	54.23
Bra015665.1-P	Field mustard	endoplasmic reticulum	49.54	53.05
PGSC0003DMT400010624	Potato	endoplasmic reticulum	48.07	53.04
Bra017948.1-P	Field mustard	endoplasmic reticulum	48.44	53.01
AT1G77510.1	Thale cress	endoplasmic reticulum	48.62	52.17
VIT_07s0031g02660.t01	Wine grape	endoplasmic reticulum	46.42	50.6
Bra008311.1-P	Field mustard	endoplasmic reticulum	46.79	49.9
PGSC0003DMT400060279	Potato	cytosol	16.33	48.9
Solyc06g005940.2.1	Tomato	nucleus, plastid	44.04	48.1
Solyc05g056400.2.1	Tomato	plastid	46.24	47.64
KRH64647	Soybean	cytosol, mitochondrion	17.8	45.75
PGSC0003DMT400036388	Potato	endoplasmic reticulum	40.55	45.19
Solyc05g018700.2.1	Tomato	plastid	39.82	43.75
Os02t0100100-01	Rice	plasma membrane	27.71	26.82
Os05t0156300-01	Rice	plasma membrane	17.25	25.61
Os01t0339900-01	Rice	plasma membrane	16.88	24.8
Os06t0163400-01	Rice	plasma membrane	21.83	22.33
Os04t0432500-01	Rice	plasma membrane	16.88	21.75
Os02t0550300-00	Rice	endoplasmic reticulum	16.88	21.7
Os09t0451500-02	Rice	plasma membrane	17.43	21.54
Os03t0287900-01	Rice	endoplasmic reticulum	5.5	20.41

Protein Annotations

Gene3D:3.40.30.10	EntrezGene:4329652	MapMan:50.5.3	EMBL:AK073161	ProteinID:BAD33310.1	ProteinID:BAF09033.1
ProteinID:BAS79202.1	ProteinID:BAS79203.1	GO:GO:0003674	GO:GO:0003756	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0016853	GO:GO:0019725	GO:GO:0034976
GO:GO:0045454	InterPro:IPR013766	EnsemblPlantsGene:Os02g0554900	EnsemblPlants:Os02t0554900-01	PFAM:PF00085	PFAM:PF13848
PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR18929	PANTHER:PTHR18929:SF186	InterPro:Prot_disulphide_isomerase
UniProt:Q69ST6	SUPFAM:SSF52833	TIGRFAMs:TIGR01130	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0000358BCD	RefSeq:XP_015626051.1	SEG:seg	:	:	:

Description

PROTEIN DISULFIDE ISOMERASE-LIKE 1;3, PROTEIN DISULFIDE ISOMERASE-LIKE 1-3, PDI-like protein 1-3Similar to Protein disulfide isomerase (Fragment). (Os02t0554900-01);Similar to Protein disulfide isomerase-like 1-3. (Os02t0554900-02)

Coordinates

chr2:-:20957208..20961970

Molecular Weight (calculated)

59078.3 Da

IEP (calculated)

4.523

GRAVY (calculated)

-0.200

Length

545 amino acids

Sequence
(BLAST)

001: MWPRAPATPP PPPWPSKPSA ASRSALRRLD LDDGRRQGTE GEENHAPLLC SPAMASSTAF AAAFALLLLA SSAAAEGEAV LTLDAGNFTE VVGAHDFIVV
101: EFYAPWCGHC NQLAPEYEAA AAALRSHDPP VVLAKVDASA DLNRGLAGEH GVQGYPTIRI LRDRGARSHN YAGPRDAAGI VAYLKRQAGP ASVEIAASAS
201: PPAADSIAND GVVVVGVFPE LSGSEFESFM AVAEKMRADY DFRHTTDAGV LPRGDRTVRG PLVRLFKPFD ELFVDSQDFD RDALEKFIES SGFPTVVTFD
301: TSPANQKYLL KYFDNAGTKA MLFLSFSDDR AEEFRTQFHE AANQYSANNI SFLIGDVTAS QGAFQYFGLK ESEVPLVFIL ASKSKYIKPT VEPDQILPYL
401: KEFTEGTLAP HVKSEPIPEV NDQPVKTVVA DNLREVVFNS GKNVLLEFYA PWCGHCQKLA PILEEVAVSL KDDEDVVIAK MDGTANDVPS DFAVEGYPSM
501: YFYSSGGNLL PYDGRTAEEI IDFITKNKGS RPGEATTTES VKDEL

Best Arabidopsis Sequence Match ( AT1G21750.1 )
(BLAST)

001: MAMRGFTLFS ILVLSLCASS IRSEETETKE FVLTLDHTNF TDTINKHDFI VVEFYAPWCG HCKQLAPEYE KAASALSSNV PPVVLAKIDA SEETNREFAT
101: QYEVQGFPTI KIFRNGGKAV QEYNGPREAE GIVTYLKKQS GPASAEIKSA DDASEVVSDK KVVVVGIFPK LSGSEFDSFM AIAEKLRSEL DFAHTSDAKL
201: LPRGESSVTG PVVRLFKPFD EQFVDSKDFD GEALEKFVKE SSIPLITVFD KDPNNHPYVI KFFESTNTKA MLFINFTGEG AESLKSKYRE VATSNKGQGL
301: SFLLGDAENS QGAFQYFGLE ESQVPLIIIQ TADDKKYLKT NVEVDQIESW VKDFKDGKIA PHKKSQPIPA ENNEPVKVVV SDSLDDIVLN SGKNVLLEFY
401: APWCGHCQKL APILDEVAVS YQSDSSVVIA KLDATANDFP KDTFDVKGFP TIYFKSASGN VVVYEGDRTK EDFISFVDKN KDTVGEPKKE EETTEEVKDE
501: L

Arabidopsis Description

PDIL1-1Protein disulfide isomerase-like 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI01]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.