Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
24083427
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0554900-01 | |
| Os04t0436300-01 | |
| Os11t0199200-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G19390.1 | Os02t0554900-01 | AT1G21750.1 | 18676877 |
| AT3G19390.1 | Os04t0436300-01 | AT1G21750.1 | 18676877 |
| AT3G19390.1 | Os11t0199200-01 | AT1G21750.1 | 18676877 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 70.82 | 74.15 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 69.18 | 73.54 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 71.02 | 73.42 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 54.9 | 73.1 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 69.59 | 73.02 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 67.55 | 70.73 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 67.35 | 70.36 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 67.14 | 70.3 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 66.94 | 69.94 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 66.73 | 69.87 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 36.33 | 68.99 |
| Os04t0670200-02 | Rice | extracellular | 67.76 | 67.48 |
| EES11628 | Sorghum | extracellular | 64.08 | 66.67 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 65.71 | 66.26 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 42.04 | 62.42 |
| VIT_03s0180g00010.t01 | Wine grape | extracellular | 51.02 | 58.69 |
| PGSC0003DMT400066566 | Potato | endoplasmic reticulum | 52.86 | 55.11 |
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 40.82 | 55.1 |
| KRH57968 | Soybean | endoplasmic reticulum | 41.02 | 54.92 |
| Solyc01g107760.2.1 | Tomato | extracellular | 52.65 | 54.89 |
| PGSC0003DMT400064314 | Potato | endoplasmic reticulum, extracellular, vacuole | 40.41 | 54.85 |
| AT3G19390.1 | Thale cress | endoplasmic reticulum | 50.0 | 54.2 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 49.39 | 53.9 |
| KRH07581 | Soybean | endoplasmic reticulum | 40.2 | 53.83 |
| PGSC0003DMT400053921 | Potato | extracellular | 39.8 | 53.57 |
| KRH04538 | Soybean | extracellular | 40.0 | 53.55 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.98 | 53.45 |
| CDY22445 | Canola | vacuole | 40.61 | 53.21 |
| AT4G36880.1 | Thale cress | vacuole | 40.82 | 53.19 |
| CDY46179 | Canola | endoplasmic reticulum | 48.78 | 53.11 |
| Bra022418.1-P | Field mustard | endoplasmic reticulum | 48.78 | 53.11 |
| CDX75633 | Canola | vacuole | 40.41 | 52.94 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 40.41 | 52.94 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 40.41 | 52.94 |
| AT3G19400.1 | Thale cress | endoplasmic reticulum, vacuole | 38.98 | 52.76 |
| Bra011746.1-P | Field mustard | vacuole | 40.2 | 52.67 |
| Bra038206.1-P | Field mustard | extracellular, plasma membrane, vacuole | 47.35 | 51.56 |
| CDY44047 | Canola | vacuole | 40.2 | 51.3 |
| CDY50154 | Canola | endoplasmic reticulum | 45.51 | 50.68 |
| Bra038208.1-P | Field mustard | endoplasmic reticulum | 45.51 | 50.57 |
| Os04t0206300-00 | Rice | extracellular | 34.9 | 50.44 |
| Os04t0208200-01 | Rice | extracellular | 35.92 | 50.43 |
| Solyc03g044230.1.1 | Tomato | extracellular | 38.78 | 50.13 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.69 | 49.77 |
| Os11t0255300-01 | Rice | extracellular | 38.37 | 49.74 |
| Os05t0108600-01 | Rice | extracellular | 36.12 | 49.44 |
| Os01t0971400-01 | Rice | extracellular | 36.33 | 48.77 |
| Os12t0273800-00 | Rice | extracellular | 33.88 | 47.43 |
| CDX99227 | Canola | endoplasmic reticulum | 48.37 | 46.75 |
| Os01t0907600-01 | Rice | extracellular | 35.31 | 46.63 |
| Os08t0556900-01 | Rice | extracellular | 35.51 | 45.19 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 33.47 | 44.81 |
| Os05t0508300-01 | Rice | plasma membrane | 40.41 | 44.0 |
Protein Annotations
| Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | EntrezGene:4337353 | MapMan:50.3.4 | EMBL:AK107506 | ProteinID:BAF16127.1 |
| ProteinID:BAS91556.1 | MEROPS:C01.029 | ProteinID:CAE02828.2 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009555 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030154 | GO:GO:0051603 |
| InterPro:Granulin | InterPro:Granulin_sf | InterPro:IPR037277 | EnsemblPlantsGene:Os04g0670500 | EnsemblPlants:Os04t0670500-01 | PFAM:PF00112 |
| PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF343 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | UniProt:Q7XR52 | SMART:SM00277 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000021C692 |
| RefSeq:XP_015637044.1 | SEG:seg | : | : | : | : |
Description
CYSTEINE PROTEASE 1Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1). (Os04t0670500-01)
Coordinates
chr4:+:34205994..34207906
Molecular Weight (calculated)
52645.1 Da
IEP (calculated)
7.610
GRAVY (calculated)
-0.359
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGGKSVA AALAMACFLL ILAAFAPPAA AAPPDIMSII RYNAEHGVRG LERTEAEARA AYDLWLARHR RGGGGGSRNG FIGEHERRFR VFWDNLKFVD
101: AHNARADERG GFRLGMNRFA DLTNGEFRAT YLGTTPAGRG RRVGEAYRHD GVEALPDSVD WRDKGAVVAP VKNQGQCGSC WAFSAVAAVE GINKIVTGEL
201: VSLSEQELVE CARNGQNSGC NGGIMDDAFA FIARNGGLDT EEDYPYTAMD GKCNLAKRSR KVVSIDGFED VPENDELSLQ KAVAHQPVSV AIDAGGREFQ
301: LYDSGVFTGR CGTNLDHGVV AVGYGTDAAT GAAYWTVRNS WGPDWGENGY IRMERNVTAR TGKCGIAMMA SYPIKKGPNP KPSPPSPAPS PPQQCDRYSK
401: CPAGTTCCCN YGIRNHCIVW GCCPVEGATC CKDHSTCCPK EYPVCNAKAR TCSKSKNSPY NIRTPAAMAR SVPEQPDSIS FVVLNREDLV
101: AHNARADERG GFRLGMNRFA DLTNGEFRAT YLGTTPAGRG RRVGEAYRHD GVEALPDSVD WRDKGAVVAP VKNQGQCGSC WAFSAVAAVE GINKIVTGEL
201: VSLSEQELVE CARNGQNSGC NGGIMDDAFA FIARNGGLDT EEDYPYTAMD GKCNLAKRSR KVVSIDGFED VPENDELSLQ KAVAHQPVSV AIDAGGREFQ
301: LYDSGVFTGR CGTNLDHGVV AVGYGTDAAT GAAYWTVRNS WGPDWGENGY IRMERNVTAR TGKCGIAMMA SYPIKKGPNP KPSPPSPAPS PPQQCDRYSK
401: CPAGTTCCCN YGIRNHCIVW GCCPVEGATC CKDHSTCCPK EYPVCNAKAR TCSKSKNSPY NIRTPAAMAR SVPEQPDSIS FVVLNREDLV
001: MGFLKLSPMI LLLAMIGVSY AMDMSIISYD ENHHITTETS RSDSEVERIY EAWMVEHGKK KMNQNGLGAE KDQRFEIFKD NLRFIDEHNT KNLSYKLGLT
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
Arabidopsis Description
RD21BProbable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.