Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 8
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400064314 | Potato | endoplasmic reticulum, extracellular, vacuole | 93.11 | 93.63 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 62.26 | 68.48 |
| Solyc03g044230.1.1 | Tomato | extracellular | 69.15 | 66.23 |
| KRH57968 | Soybean | endoplasmic reticulum | 66.12 | 65.57 |
| KRH04538 | Soybean | extracellular | 65.01 | 64.48 |
| KRH07581 | Soybean | endoplasmic reticulum | 64.74 | 64.21 |
| CDX75633 | Canola | vacuole | 58.13 | 56.42 |
| Solyc04g082710.2.1 | Tomato | cytosol | 47.38 | 56.39 |
| AT4G36880.1 | Thale cress | vacuole | 58.4 | 56.38 |
| CDY22445 | Canola | vacuole | 57.58 | 55.88 |
| Bra011746.1-P | Field mustard | vacuole | 57.58 | 55.88 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 57.3 | 55.62 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 56.47 | 54.81 |
| Solyc12g094700.1.1 | Tomato | extracellular | 49.86 | 54.68 |
| CDY44047 | Canola | vacuole | 57.02 | 53.91 |
| Solyc02g076970.1.1 | Tomato | extracellular | 40.5 | 52.31 |
| Solyc12g056020.1.1 | Tomato | extracellular | 48.21 | 51.32 |
| Solyc12g056000.1.1 | Tomato | endoplasmic reticulum | 47.93 | 51.18 |
| Solyc12g056010.1.1 | Tomato | endoplasmic reticulum | 46.83 | 50.0 |
| Solyc01g107760.2.1 | Tomato | extracellular | 62.81 | 48.51 |
| Solyc03g006200.1.1 | Tomato | endoplasmic reticulum, extracellular | 40.22 | 48.03 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 47.11 | 47.77 |
| Solyc02g076910.2.1 | Tomato | extracellular, golgi | 45.73 | 47.29 |
| Solyc12g088670.1.1 | Tomato | endoplasmic reticulum | 60.61 | 47.21 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 46.56 | 46.94 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 59.78 | 46.67 |
| Solyc04g078540.2.1 | Tomato | endoplasmic reticulum | 60.33 | 46.4 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 59.78 | 46.17 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 58.4 | 45.4 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.01 | 45.38 |
| TraesCS2B01G576300.1 | Wheat | unclear | 57.02 | 44.14 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 57.58 | 44.0 |
| TraesCS2A01G545700.1 | Wheat | unclear | 57.02 | 43.86 |
| Os04t0670200-02 | Rice | extracellular | 58.13 | 42.89 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 54.82 | 42.52 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 54.82 | 42.52 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 54.82 | 42.43 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 54.27 | 42.18 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 54.27 | 42.09 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 53.17 | 41.87 |
| EES11628 | Sorghum | extracellular | 54.27 | 41.83 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 54.27 | 41.56 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 53.17 | 41.24 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 53.17 | 41.15 |
| Os04t0670500-01 | Rice | extracellular | 55.1 | 40.82 |
| Solyc03g006210.1.1 | Tomato | extracellular | 38.57 | 40.46 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 54.82 | 39.8 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 53.17 | 39.71 |
| Solyc02g077040.2.1 | Tomato | extracellular | 37.47 | 39.42 |
| Solyc02g076980.2.1 | Tomato | endoplasmic reticulum, golgi | 36.36 | 38.26 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 26.45 | 37.21 |
| Solyc04g080880.2.1 | Tomato | extracellular | 43.25 | 18.58 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | MEROPS:C01.029 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 |
| UniProt:K4BDA0 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g093040.2 | EnsemblPlants:Solyc02g093040.2.1 | UniParc:UPI0002768308 | SEG:seg |
Description
No Description!
Coordinates
chr2:-:53982990..53984514
Molecular Weight (calculated)
40469.8 Da
IEP (calculated)
6.409
GRAVY (calculated)
-0.466
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTLITTLL LALFSSLSYA IDMSIIDHKN KEGILYEKWL AEHGKIYNAL GEKEKRFEIF KDNLRFIEEY NASENRTFKV GLNQFADLTN DEYRAVYLGT
101: KSDARRRLVK SKNTSQRYAS PPNELLPHSV DWRKKGAVAP IKNQGSCGSC WAFSTVAAVE GINQIVTGEM ITLSEQELVD CDRSQNGGCN GGLMDYAFEF
201: IISNGGMDTE NHYPYRGVDG RCDPIRKNSK VVSIDDYEDV PRNEKALQKA VAHQPVSVAI EASGKAFQLY TSGVFTGDCG EKVDHGVVVV GYGSEDGNDY
301: WLVRNSWGTK WGESGYVKME RNVKNGHLGK CGIMTEASYP IKEAINKRII TTSNSNEEMI SSI
101: KSDARRRLVK SKNTSQRYAS PPNELLPHSV DWRKKGAVAP IKNQGSCGSC WAFSTVAAVE GINQIVTGEM ITLSEQELVD CDRSQNGGCN GGLMDYAFEF
201: IISNGGMDTE NHYPYRGVDG RCDPIRKNSK VVSIDDYEDV PRNEKALQKA VAHQPVSVAI EASGKAFQLY TSGVFTGDCG EKVDHGVVVV GYGSEDGNDY
301: WLVRNSWGTK WGESGYVKME RNVKNGHLGK CGIMTEASYP IKEAINKRII TTSNSNEEMI SSI
001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA
Arabidopsis Description
RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.