Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400026457 Potato extracellular 93.24 83.44
PGSC0003DMT400026461 Potato extracellular 92.88 76.76
TraesCSU01G171200.1 Wheat cytosol, nucleus, plastid 55.16 72.77
Solyc12g056000.1.1 Tomato endoplasmic reticulum 87.19 72.06
Solyc12g056010.1.1 Tomato endoplasmic reticulum 86.48 71.47
Solyc12g056020.1.1 Tomato extracellular 86.12 70.97
TraesCS6B01G379900.1 Wheat cytosol, mitochondrion, nucleus 36.3 68.92
TraesCSU01G264200.1 Wheat cytosol, mitochondrion, nucleus, plastid 57.3 68.8
Zm00001d037301_P001 Maize mitochondrion 51.25 67.92
TraesCS2A01G054800.1 Wheat cytosol, mitochondrion, nucleus 35.59 67.57
TraesCS6A01G345600.1 Wheat cytosol, mitochondrion, nucleus 35.59 67.57
TraesCS4A01G273900.1 Wheat cytosol, nucleus, plastid 22.78 67.37
TraesCS6A01G346400.1 Wheat cytosol 22.78 67.37
TraesCS6B01G378700.1 Wheat cytosol, mitochondrion, nucleus 35.23 66.89
TraesCS2A01G054500.1 Wheat cytosol, nucleus, plastid 22.42 66.32
TraesCS2A01G054600.1 Wheat cytosol, nucleus, plastid 22.42 66.32
TraesCSU01G144100.1 Wheat cytosol, nucleus, plastid 22.42 66.32
TraesCSU01G230900.1 Wheat cytosol, nucleus, plastid 22.42 66.32
VIT_10s0003g01100.t01 Wine grape extracellular 69.75 57.65
TraesCS6A01G346500.1 Wheat extracellular 55.87 55.87
KXG19778 Sorghum cytosol, nucleus, plastid 61.21 55.84
Zm00001d045709_P001 Maize extracellular 62.28 55.73
Solyc03g006200.1.1 Tomato endoplasmic reticulum, extracellular 60.14 55.59
TraesCS2B01G067700.1 Wheat extracellular 66.55 55.0
TraesCS2B01G067800.1 Wheat extracellular 66.55 55.0
TraesCS6D01G144100.1 Wheat cytosol 59.07 54.97
TraesCS2B01G067900.1 Wheat extracellular 66.19 54.71
Os04t0206300-00 Rice extracellular 65.84 54.57
TraesCSU01G143100.1 Wheat extracellular 65.84 54.41
TraesCSU01G144000.1 Wheat extracellular 65.84 54.41
HORVU2Hr1G009150.1 Barley extracellular, vacuole 65.84 54.25
Zm00001d037303_P001 Maize extracellular 65.48 54.12
TraesCS6D01G329500.1 Wheat extracellular 65.12 53.98
TraesCS6D01G329600.1 Wheat extracellular 65.12 53.98
TraesCS4A01G273800.1 Wheat extracellular 65.48 53.96
TraesCS4D01G037200.1 Wheat extracellular 65.48 53.96
Zm00001d045708_P001 Maize extracellular 62.99 53.8
TraesCS6B01G380200.1 Wheat extracellular 64.77 53.69
TraesCS4A01G274000.1 Wheat extracellular 65.12 53.67
TraesCS4B01G039700.1 Wheat extracellular 65.12 53.67
TraesCS4B01G039800.1 Wheat extracellular 65.12 53.67
TraesCS4D01G037000.1 Wheat extracellular 65.12 53.67
TraesCS4D01G037100.1 Wheat extracellular 65.12 53.67
TraesCS4D01G037300.1 Wheat extracellular 65.12 53.67
TraesCS4D01G037500.1 Wheat extracellular 65.12 53.67
HORVU4Hr1G006310.1 Barley endoplasmic reticulum, extracellular 65.84 53.62
TraesCS4A01G274100.1 Wheat extracellular 64.06 53.57
HORVU2Hr1G009610.1 Barley extracellular 64.77 53.53
HORVU2Hr1G009640.1 Barley extracellular 64.77 53.53
TraesCS1D01G225100.1 Wheat extracellular 64.41 53.39
TraesCS6A01G346600.1 Wheat extracellular 64.41 53.39
TraesCS4B01G039900.1 Wheat endoplasmic reticulum, extracellular 64.77 53.37
TraesCS4D01G036700.1 Wheat extracellular 64.77 53.37
TraesCS4D01G036900.1 Wheat extracellular 64.77 53.37
EER89590 Sorghum extracellular 64.41 53.24
TraesCS7D01G220000.1 Wheat extracellular 64.41 53.24
Zm00001d045713_P001 Maize extracellular 64.41 53.24
HORVU6Hr1G084520.5 Barley extracellular 64.06 53.1
TraesCS6B01G378400.1 Wheat extracellular 64.06 53.1
TraesCS6B01G380000.1 Wheat extracellular 64.06 53.1
TraesCS6D01G328500.1 Wheat extracellular 64.06 53.1
TraesCS4B01G039500.1 Wheat extracellular 64.41 53.08
TraesCS4B01G040000.1 Wheat endoplasmic reticulum, extracellular 64.41 53.08
Zm00001d045711_P001 Maize extracellular 64.06 52.94
TraesCS6A01G345900.1 Wheat extracellular 63.7 52.8
TraesCS6A01G346800.1 Wheat extracellular 63.7 52.8
TraesCS6D01G328100.1 Wheat extracellular 63.7 52.8
TraesCS6D01G328600.1 Wheat extracellular 63.7 52.8
HORVU4Hr1G006280.2 Barley extracellular 64.41 52.77
EES10550 Sorghum extracellular 63.7 52.65
KXG19775 Sorghum extracellular 63.7 52.65
KXG19777 Sorghum extracellular 63.7 52.65
HORVU4Hr1G006270.1 Barley extracellular, vacuole 64.06 52.63
TraesCS1A01G223500.1 Wheat extracellular 63.35 52.51
TraesCS1B01G236800.1 Wheat extracellular 63.35 52.51
TraesCS6B01G378900.1 Wheat extracellular 63.35 52.51
TraesCS6B01G379200.1 Wheat extracellular 63.35 52.51
TraesCS6D01G328000.1 Wheat extracellular 63.35 52.51
TraesCS6D01G328300.1 Wheat extracellular 63.35 52.51
HORVU1Hr1G060040.1 Barley endoplasmic reticulum, extracellular 63.7 52.49
TraesCS2B01G068000.1 Wheat extracellular, golgi, plastid 54.09 52.41
TraesCS6D01G329400.1 Wheat extracellular 60.85 52.29
TraesCS6B01G379000.1 Wheat extracellular 62.99 52.21
TraesCS6D01G329900.1 Wheat extracellular 62.99 52.21
TraesCSU01G163600.1 Wheat cytosol 50.53 52.21
Zm00001d004371_P001 Maize extracellular 64.41 52.16
HORVU7Hr1G044230.3 Barley extracellular 62.99 52.06
TraesCS6B01G182200.1 Wheat extracellular 63.35 52.05
HORVU6Hr1G083420.1 Barley extracellular 62.99 51.91
TraesCS4B01G039600.1 Wheat extracellular 62.99 51.91
HORVU2Hr1G009510.1 Barley cytosol 63.35 51.9
TraesCSU01G161800.1 Wheat cytosol 49.82 51.85
TraesCS5B01G523100.1 Wheat extracellular 62.63 51.76
TraesCS7D01G471400.1 Wheat extracellular 62.63 51.76
TraesCS6B01G379300.1 Wheat extracellular 62.28 51.62
TraesCS4D01G037400.1 Wheat extracellular 59.79 51.22
TraesCS7B01G387600.1 Wheat extracellular 61.92 51.18
TraesCS6A01G154300.1 Wheat extracellular 62.28 51.17
TraesCS6D01G144000.1 Wheat endoplasmic reticulum, extracellular 62.28 51.17
Os12t0273800-00 Rice extracellular 63.7 51.14
KXG25861 Sorghum endoplasmic reticulum 61.21 51.04
KXG25862 Sorghum endoplasmic reticulum 61.21 51.04
KXG25863 Sorghum endoplasmic reticulum 61.21 51.04
HORVU2Hr1G023980.2 Barley vacuole 61.92 50.88
TraesCS6B01G182100.1 Wheat endoplasmic reticulum, extracellular 61.92 50.88
Os04t0208200-01 Rice extracellular 62.99 50.72
EES10461 Sorghum endoplasmic reticulum 60.85 50.59
TraesCS7B01G292000.1 Wheat cytosol, extracellular, nucleus 55.16 50.49
EES10463 Sorghum endoplasmic reticulum 60.5 50.3
OQU81187 Sorghum endoplasmic reticulum, extracellular 61.57 49.86
Solyc02g076910.2.1 Tomato extracellular, golgi 61.92 49.57
Zm00001d004364_P001 Maize nucleus 54.09 49.51
TraesCS4D01G036600.1 Wheat extracellular 46.62 49.25
Zm00001d025038_P001 Maize endoplasmic reticulum, extracellular 61.21 48.86
Zm00001d008796_P001 Maize extracellular 59.07 48.4
OQU81188 Sorghum cytosol, nucleus, plastid 47.33 48.19
Zm00001d004355_P001 Maize extracellular 58.72 48.1
TraesCS5D01G076500.1 Wheat endoplasmic reticulum, extracellular 56.58 47.32
TraesCS4A01G273700.1 Wheat extracellular 50.89 47.19
TraesCS5B01G072400.1 Wheat extracellular 56.58 47.18
Solyc04g082710.2.1 Tomato cytosol 50.18 46.23
TraesCS2A01G056000.1 Wheat endoplasmic reticulum, extracellular 54.8 45.97
Solyc03g111730.2.1 Tomato endoplasmic reticulum 58.72 45.83
Solyc05g013920.2.1 Tomato endoplasmic reticulum 55.87 43.85
Solyc12g094700.1.1 Tomato extracellular 51.6 43.81
Solyc02g077040.2.1 Tomato extracellular 53.74 43.77
Solyc03g006210.1.1 Tomato extracellular 52.31 42.49
TraesCS6D01G329300.1 Wheat extracellular 45.91 40.57
Solyc02g093040.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 52.31 40.5
Solyc03g044230.1.1 Tomato extracellular 50.89 37.73
Solyc02g076980.2.1 Tomato endoplasmic reticulum, golgi 46.26 37.68
Solyc04g078540.2.1 Tomato endoplasmic reticulum 54.45 32.42
Solyc01g107760.2.1 Tomato extracellular 53.02 31.7
TraesCS2A01G054700.1 Wheat cytosol, mitochondrion, nucleus 11.74 30.84
Solyc12g088670.1.1 Tomato endoplasmic reticulum 50.89 30.69
TraesCS4D01G036800.1 Wheat extracellular 14.95 28.38
TraesCS2D01G053700.1 Wheat extracellular 8.9 20.49
Solyc04g080880.2.1 Tomato extracellular 49.82 16.57
Protein Annotations
Gene3D:3.90.70.10MapMan:50.3.4MEROPS:C01.104GO:GO:0003674GO:GO:0003824GO:GO:0004197
GO:GO:0005575GO:GO:0005576GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005764GO:GO:0005773GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0008234GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603
UniProt:K4B8S4PFAM:PF00112PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640
PANTHER:PTHR12411PANTHER:PTHR12411:SF297InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CSMART:SM00645SUPFAM:SSF54001SignalP:SignalP-noTMEnsemblPlantsGene:Solyc02g076970.1
EnsemblPlants:Solyc02g076970.1.1UniParc:UPI000276794D::::
Description
No Description!
Coordinates
chr2:+:42061572..42062684
Molecular Weight (calculated)
30365.6 Da
IEP (calculated)
4.714
GRAVY (calculated)
-0.306
Length
281 amino acids
Sequence
(BLAST)
001: MALTINWKSA FLALAVLTMW TIEVTSRELN EASMVQKHEK WMARFGRVYR DDAEKAKRYE DVTAPATMDW RKKGAVTGVK DQGQCGCCWA FSAVAATEGI
101: NEIKTGKLIS LSEQELVDCD TSSDMGCEGG LMDDAFKFII KNHGLTTESN YPYEGTDGTC KTGKKSNGAA KITGYEDVPA NSESSLLSAV ANQPVSVAID
201: ASGSDFQFYS SGVFTGECGT ELDHGVTAVG YGITSDGTKY WLVKNSWGTS WGENGYIRMQ RGIDAKEGIC GIAMQASYPT A
Best Arabidopsis Sequence Match ( AT3G48340.1 )
(BLAST)
001: MKKLLLIFLF SLVILQTACG FDYDDKEIES EEGLSTLYDR WRSHHSVPRS LNEREKRFNV FRHNVMHVHN TNKKNRSYKL KLNKFADLTI NEFKNAYTGS
101: NIKHHRMLQG PKRGSKQFMY DHENLSKLPS SVDWRKKGAV TEIKNQGKCG SCWAFSTVAA VEGINKIKTN KLVSLSEQEL VDCDTKQNEG CNGGLMEIAF
201: EFIKKNGGIT TEDSYPYEGI DGKCDASKDN GVLVTIDGHE DVPENDENAL LKAVANQPVS VAIDAGSSDF QFYSEGVFTG SCGTELNHGV AAVGYGSERG
301: KKYWIVRNSW GAEWGEGGYI KIEREIDEPE GRCGIAMEAS YPIKLSSSNP TPKDGDVKDE L
Arabidopsis Description
CEP2KDEL-tailed cysteine endopeptidase CEP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STL4]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.