Factsheet for Os04t0208200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

extracellular: 18372294
extracellular: 24083427
extracellular: 25047395
extracellular: 26072143
extracellular: 28232208

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G144100.1	Wheat	cytosol	61.32	70.86
Os04t0206300-00	Rice	extracellular	67.91	69.91
OQU81187	Sorghum	endoplasmic reticulum, extracellular	69.34	69.74
Zm00001d025038_P001	Maize	endoplasmic reticulum, extracellular	70.2	69.6
TraesCS5B01G072400.1	Wheat	extracellular	65.9	68.25
TraesCS6D01G144000.1	Wheat	endoplasmic reticulum, extracellular	66.76	68.13
TraesCS6B01G182100.1	Wheat	endoplasmic reticulum, extracellular	66.48	67.84
TraesCS6B01G182200.1	Wheat	extracellular	66.48	67.84
TraesCS5D01G076500.1	Wheat	endoplasmic reticulum, extracellular	64.76	67.26
TraesCS6A01G154300.1	Wheat	extracellular	65.9	67.25
TraesCS2A01G056000.1	Wheat	endoplasmic reticulum, extracellular	62.75	65.37
Solyc02g076970.1.1	Tomato	extracellular	50.72	62.99
Os12t0273800-00	Rice	extracellular	61.89	61.71
PGSC0003DMT400026461	Potato	extracellular	58.74	60.29
Solyc12g056000.1.1	Tomato	endoplasmic reticulum	58.74	60.29
PGSC0003DMT400026457	Potato	extracellular	54.15	60.19
VIT_12s0028g02250.t01	Wine grape	cytosol	51.0	59.93
KRH55771	Soybean	cytosol, nucleus	47.85	59.64
KRH25039	Soybean	extracellular, golgi, vacuole	53.3	59.42
PGSC0003DMT400086163	Potato	cytosol	39.54	59.23
PGSC0003DMT400012877	Potato	endoplasmic reticulum, extracellular, vacuole	57.59	59.12
PGSC0003DMT400012885	Potato	extracellular	51.86	58.58
VIT_10s0003g01100.t01	Wine grape	extracellular	57.02	58.53
Solyc12g056010.1.1	Tomato	endoplasmic reticulum	57.02	58.53
PGSC0003DMT400012881	Potato	endoplasmic reticulum	57.02	58.53
KRH55800	Soybean	endoplasmic reticulum, golgi	57.31	58.31
VIT_12s0028g02270.t01	Wine grape	endoplasmic reticulum, extracellular	56.73	58.06
KRH25765	Soybean	endoplasmic reticulum, golgi	57.02	58.02
KRG88601	Soybean	endoplasmic reticulum, golgi	57.02	58.02
VIT_12s0028g02290.t01	Wine grape	endoplasmic reticulum, extracellular	56.45	57.77
Solyc12g056020.1.1	Tomato	extracellular	56.16	57.48
KRG88605	Soybean	endoplasmic reticulum, golgi	56.45	57.43
KRH25729	Soybean	endoplasmic reticulum, golgi	56.45	57.43
VIT_12s0028g02300.t01	Wine grape	endoplasmic reticulum, extracellular	55.87	57.18
KRH25728	Soybean	extracellular	55.87	56.85
KRH25766	Soybean	extracellular	55.87	56.85
KRH29892	Soybean	extracellular, golgi, vacuole	55.87	56.85
KRH55750	Soybean	extracellular	55.87	56.85
KRH55761	Soybean	extracellular	55.59	56.56
KRH55801	Soybean	golgi, vacuole	55.59	56.56
VIT_12s0028g02260.t01	Wine grape	endoplasmic reticulum, extracellular	51.86	56.21
KRH55752	Soybean	endoplasmic reticulum	55.01	55.98
KRH55762	Soybean	endoplasmic reticulum	54.73	55.69
KRH13244	Soybean	extracellular	52.44	55.12
KRH25038	Soybean	extracellular	52.44	53.35
KRH55769	Soybean	extracellular, vacuole	53.01	52.56
Solyc03g006200.1.1	Tomato	endoplasmic reticulum, extracellular	45.27	51.97
Os08t0556900-01	Rice	extracellular	51.86	47.01
Os05t0108600-01	Rice	extracellular	47.28	46.09
Os11t0255300-01	Rice	extracellular	49.57	45.77
Os01t0971400-01	Rice	extracellular	47.85	45.75
Os01t0907600-01	Rice	extracellular	46.99	44.2
Os02t0715000-01	Rice	endoplasmic reticulum	46.13	43.99
Os04t0670500-01	Rice	extracellular	50.43	35.92
Os05t0508300-01	Rice	plasma membrane	44.13	34.22
Os04t0670200-02	Rice	extracellular	48.14	34.15

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EntrezGene:4335170	EMBL:AY781344	ProteinID:BAS88115.1	MEROPS:C01.104
GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:Os04g0208200	EnsemblPlants:Os04t0208200-01	PFAM:PF00112
PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF424	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	UniProt:Q2TN87	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
SignalP:SignalP-noTM	UniParc:UPI0000661B4B	RefSeq:XP_015634253.1	SEG:seg	:	:

Description

senescence-associated gene 12Cysteine proteinase. (Os04t0208200-01)

Coordinates

chr4:+:7250381..7251823

Molecular Weight (calculated)

36869.2 Da

IEP (calculated)

5.097

GRAVY (calculated)

-0.173

Length

349 amino acids

Sequence
(BLAST)

001: MAYTNLSKKL AVALVALAVA CAHALAARDL VDAAAMAQRH ERWMAKHGRA YADDAEKARR LEVFRDNVAF IESVNAAASQ HKFWLEENQF ADLTNAEFRA
101: TRTGLRPSSS RGNRAPTSFR YANVSTGDLP ASVDWRGKGA VNPVKDQGDC GCCWAFSAVA AMEGAVKLAT GKLVSLSEQQ LVSCDVKGED QGCEGGLMDD
201: AFDFIIKNGG LAAESDYPYT ASDDKCATAG AGAAAATIKG YEDVPANDEA ALLKAVANQP VSVAIDGGDR HFQFYKGGVL SGAAGCATEL DHAITAVGYG
301: VASDGTKYWL MKNSWGTSWG EDGYVRMERG VADKEGVCGL AMMASYPTA

Best Arabidopsis Sequence Match ( AT5G45890.1 )
(BLAST)

001: MALKHMQIFL FVAIFSSFCF SITLSRPLDN ELIMQKRHIE WMTKHGRVYA DVKEENNRYV VFKNNVERIE HLNSIPAGRT FKLAVNQFAD LTNDEFRSMY
101: TGFKGVSALS SQSQTKMSPF RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCEGGLMDTA
201: FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST
301: NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI

Arabidopsis Description

SAG12Senescence-specific cysteine protease SAG12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ47]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.