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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025038_P001 Maize endoplasmic reticulum, extracellular 85.88 84.66
TraesCS6D01G144100.1 Wheat cytosol 70.89 81.46
TraesCS6B01G182200.1 Wheat extracellular 78.67 79.82
TraesCS6B01G182100.1 Wheat endoplasmic reticulum, extracellular 77.81 78.95
TraesCS6D01G144000.1 Wheat endoplasmic reticulum, extracellular 77.52 78.66
TraesCS6A01G154300.1 Wheat extracellular 76.66 77.78
TraesCS5B01G072400.1 Wheat extracellular 74.35 76.56
TraesCS5D01G076500.1 Wheat endoplasmic reticulum, extracellular 73.78 76.19
TraesCS2A01G056000.1 Wheat endoplasmic reticulum, extracellular 70.61 73.13
KXG19778 Sorghum cytosol, nucleus, plastid 62.54 70.45
EES10550 Sorghum extracellular 68.3 69.71
KXG19775 Sorghum extracellular 68.3 69.71
EER89590 Sorghum extracellular 68.01 69.41
Os04t0208200-01 Rice extracellular 69.74 69.34
KXG19777 Sorghum extracellular 67.72 69.12
EES10463 Sorghum endoplasmic reticulum 62.82 64.5
EES10461 Sorghum endoplasmic reticulum 62.54 64.2
KXG25861 Sorghum endoplasmic reticulum 62.25 64.09
KXG25862 Sorghum endoplasmic reticulum 62.25 64.09
KXG25863 Sorghum endoplasmic reticulum 62.25 64.09
Solyc02g076970.1.1 Tomato extracellular 49.86 61.57
VIT_12s0028g02250.t01 Wine grape cytosol 51.87 60.61
PGSC0003DMT400086163 Potato cytosol 40.63 60.52
OQU81188 Sorghum cytosol, nucleus, plastid 48.13 60.51
PGSC0003DMT400026457 Potato extracellular 54.18 59.87
PGSC0003DMT400026461 Potato extracellular 58.21 59.41
KRH55771 Soybean cytosol, nucleus 47.84 59.29
Solyc12g056000.1.1 Tomato endoplasmic reticulum 57.93 59.12
VIT_10s0003g01100.t01 Wine grape extracellular 57.35 58.53
Solyc12g056010.1.1 Tomato endoplasmic reticulum 57.06 58.24
EER93437 Sorghum endoplasmic reticulum 59.08 58.07
KRG88601 Soybean endoplasmic reticulum, golgi 57.35 58.02
Solyc12g056020.1.1 Tomato extracellular 56.77 57.77
KRH55800 Soybean endoplasmic reticulum, golgi 57.06 57.73
KRH25765 Soybean endoplasmic reticulum, golgi 57.06 57.73
PGSC0003DMT400012877 Potato endoplasmic reticulum, extracellular, vacuole 56.48 57.65
PGSC0003DMT400012881 Potato endoplasmic reticulum 56.48 57.65
KRG88605 Soybean endoplasmic reticulum, golgi 56.77 57.43
KRH25729 Soybean endoplasmic reticulum, golgi 56.77 57.43
VIT_12s0028g02270.t01 Wine grape endoplasmic reticulum, extracellular 56.2 57.18
VIT_12s0028g02290.t01 Wine grape endoplasmic reticulum, extracellular 55.91 56.89
KRH25039 Soybean extracellular, golgi, vacuole 51.3 56.87
VIT_12s0028g02300.t01 Wine grape endoplasmic reticulum, extracellular 55.62 56.6
KRH55752 Soybean endoplasmic reticulum 55.62 56.27
PGSC0003DMT400012885 Potato extracellular 49.86 55.99
VIT_12s0028g02260.t01 Wine grape endoplasmic reticulum, extracellular 51.87 55.9
KRH55762 Soybean endoplasmic reticulum 55.04 55.69
KRH55801 Soybean golgi, vacuole 54.76 55.39
KRH29892 Soybean extracellular, golgi, vacuole 54.47 55.1
KRH25728 Soybean extracellular 54.47 55.1
KRH55761 Soybean extracellular 54.47 55.1
KRH55750 Soybean extracellular 54.47 55.1
KRH25766 Soybean extracellular 54.18 54.81
KRH13244 Soybean extracellular 50.72 53.01
Solyc03g006200.1.1 Tomato endoplasmic reticulum, extracellular 46.11 52.63
KRH25038 Soybean extracellular 51.87 52.48
KRH55769 Soybean extracellular, vacuole 52.16 51.42
EES09937 Sorghum endoplasmic reticulum 50.14 46.9
EES01927 Sorghum extracellular 48.41 45.53
EES15197 Sorghum endoplasmic reticulum 48.7 45.43
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 47.26 44.2
KXG20680 Sorghum endoplasmic reticulum, extracellular, vacuole 44.96 43.58
EER90747 Sorghum endoplasmic reticulum 47.26 43.04
EES07368 Sorghum extracellular 43.8 42.7
EES02142 Sorghum vacuole 45.24 41.53
EER88857 Sorghum endoplasmic reticulum 42.94 40.05
EER88858 Sorghum golgi, vacuole 43.8 38.29
KXG27269 Sorghum endoplasmic reticulum 50.72 37.93
EES13064 Sorghum extracellular, plasma membrane, vacuole 47.84 35.55
EES11628 Sorghum extracellular 46.11 33.97
EES18460 Sorghum endoplasmic reticulum 42.07 31.6
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10UniProt:A0A1Z5RBV9GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0016787GO:GO:0019538
EnsemblPlants:OQU81187ProteinID:OQU81187ProteinID:OQU81187.1PFAM:PF00112PFAM:PF08246PRINTS:PR00705
ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF424InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29
SMART:SM00645SMART:SM00848EnsemblPlantsGene:SORBI_3006G022800SUPFAM:SSF54001SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0003C6CF5CSEG:seg::::
Description
hypothetical protein
Coordinates
chr6:+:3973663..3974940
Molecular Weight (calculated)
37050.9 Da
IEP (calculated)
4.407
GRAVY (calculated)
-0.266
Length
347 amino acids
Sequence
(BLAST)
001: MATHHSSAFL LAAIVAFAGA LSTALAARDL GDQAMVARHD EWMAKYGRVY SDAAEKARRF EVFKANVVFI ESVNAGNHKF ELEANQFADL TDDEFRATWT
101: GYRPRRPAAA ASSRKATGFR YANVSLADVP TSVDWRTKGA VTPIKDQGEC GCCWAFSAVA SMEGAVKIST GKLVSLSEQE LVDCDVNGMD QGCEGGEMDD
201: AFEFVVDNGG LTTESKYPYT GSDGNCNSDE AKNDAASITG YEDVPANDET SLRKAVANQP VSVAVDGGDN LFRFYKGGVL SGACGTELDH GIAAVGYGVA
301: GDGTKFWLMK NSWGTSWGEA GYIRMERDIA DDEGLCGLAM QPSYPTA
Best Arabidopsis Sequence Match ( AT5G45890.1 )
(BLAST)
001: MALKHMQIFL FVAIFSSFCF SITLSRPLDN ELIMQKRHIE WMTKHGRVYA DVKEENNRYV VFKNNVERIE HLNSIPAGRT FKLAVNQFAD LTNDEFRSMY
101: TGFKGVSALS SQSQTKMSPF RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCEGGLMDTA
201: FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST
301: NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI
Arabidopsis Description
SAG12Senescence-specific cysteine protease SAG12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ47]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.