CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88857	Sorghum	endoplasmic reticulum	77.58	82.8
Zm00001d036542_P001	Maize	endoplasmic reticulum, golgi	81.11	79.31
KXG20680	Sorghum	endoplasmic reticulum, extracellular, vacuole	61.96	68.72
Bra013705.1-P	Field mustard	extracellular	39.04	47.26
AT4G23520.1	Thale cress	endoplasmic reticulum	42.32	47.19
KXG19778	Sorghum	cytosol, nucleus, plastid	36.02	46.43
KXG25863	Sorghum	endoplasmic reticulum	38.79	45.7
KXG25862	Sorghum	endoplasmic reticulum	38.79	45.7
KXG25861	Sorghum	endoplasmic reticulum	38.79	45.7
OQU81188	Sorghum	cytosol, nucleus, plastid	31.74	45.65
EER93437	Sorghum	endoplasmic reticulum	40.55	45.61
KXG19777	Sorghum	extracellular	38.79	45.29
EES10550	Sorghum	extracellular	38.79	45.29
KXG19775	Sorghum	extracellular	38.79	45.29
EES10463	Sorghum	endoplasmic reticulum	38.54	45.27
EER89590	Sorghum	extracellular	38.54	45.0
EES01927	Sorghum	extracellular	41.81	44.99
EES10461	Sorghum	endoplasmic reticulum	38.29	44.97
AT4G11310.1	Thale cress	endoplasmic reticulum	41.06	44.78
EER90747	Sorghum	endoplasmic reticulum	42.57	44.36
EES09937	Sorghum	endoplasmic reticulum	41.06	43.94
AT4G11320.1	Thale cress	endoplasmic reticulum	41.06	43.94
OQU81187	Sorghum	endoplasmic reticulum, extracellular	38.29	43.8
KXG27269	Sorghum	endoplasmic reticulum	51.13	43.75
CDY25281	Canola	extracellular	40.55	43.4
Bra033148.1-P	Field mustard	extracellular	40.55	43.4
CDY37617	Canola	endoplasmic reticulum, extracellular	40.3	43.24
EES15197	Sorghum	endoplasmic reticulum	40.3	43.01
CDY25283	Canola	vacuole	40.05	42.63
Bra033146.1-P	Field mustard	vacuole	40.05	42.63
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	39.29	42.05
CDY63262	Canola	extracellular, plasma membrane, vacuole	26.2	41.94
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	39.04	41.67
EES02142	Sorghum	vacuole	39.55	41.53
EES13064	Sorghum	extracellular, plasma membrane, vacuole	48.61	41.33
EES07368	Sorghum	extracellular	37.03	41.29
CDY16132	Canola	endoplasmic reticulum, extracellular, vacuole	39.29	41.16
EES11628	Sorghum	extracellular	44.84	37.79
EES18460	Sorghum	endoplasmic reticulum	41.81	35.93

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	EntrezGene:8063785	UniProt:C5Z8D3	EnsemblPlants:EER88858	ProteinID:EER88858
ProteinID:EER88858.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576
GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF526
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	EnsemblPlantsGene:SORBI_3010G239400	SUPFAM:SSF54001	unigene:Sbi.2627
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A890DA	RefSeq:XP_002437491.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:58137843..58139795

Molecular Weight (calculated)

42676.2 Da

IEP (calculated)

5.853

GRAVY (calculated)

-0.257

Length

397 amino acids

Sequence
(BLAST)

001: MRPPRSAVPA MALALALVVA LLALATTAVA RHSYTTTIVP APAERADEEV RRMYEAWKSK HGRPRGNCDM AGDEDRLRLE VFRDNLRYID AHNAEADAGL
101: HTFRLGLTPF ADLTLEEYRG RALGFRARHR GGPSARAAAS RVGSGGTRSH HRRPRPRPRC GDLPDAIDWR QLGAVTDVKN QEQCGGCWAF SAVAAIEGIN
201: AIVTGNLVSL SEQEIIDCDT QDSGCNGGQM ENAFQFVIDN GGIDSEADYP FIATDGTCDA NKANDEKVAA IDGFVEVASN NETALQEAVA IQPVSVAIDA
301: GGRAFQHYSS GIFNGPCGTN LDHGVTVVGY GSENGKAYWI VKNSWSDSWG EAGYIRIRRN VFLPVGKCGI AMDASYPVKD TYGPAATAMD VLKMVLA

Best Arabidopsis Sequence Match ( AT1G47128.1 )
(BLAST)

001: MGFLKPTMAI LFLAMVAVSS AVDMSIISYD EKHGVSTTGG RSEAEVMSIY EAWLVKHGKA QSQNSLVEKD RRFEIFKDNL RFVDEHNEKN LSYRLGLTRF
101: ADLTNDEYRS KYLGAKMEKK GERRTSLRYE ARVGDELPES IDWRKKGAVA EVKDQGGCGS CWAFSTIGAV EGINQIVTGD LITLSEQELV DCDTSYNEGC
201: NGGLMDYAFE FIIKNGGIDT DKDYPYKGVD GTCDQIRKNA KVVTIDSYED VPTYSEESLK KAVAHQPISI AIEAGGRAFQ LYDSGIFDGS CGTQLDHGVV
301: AVGYGTENGK DYWIVRNSWG KSWGESGYLR MARNIASSSG KCGIAIEPSY PIKNGENPPN PGPSPPSPIK PPTQCDSYYT CPESNTCCCL FEYGKYCFAW
401: GCCPLEAATC CDDNYSCCPH EYPVCDLDQG TCLLSKNSPF SVKALKRKPA TPFWSQGRKN IA

Arabidopsis Description

RD21ARD21A [Source:UniProtKB/TrEMBL;Acc:A0A178WIH7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.