Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | EES00059 | AT3G01340.1 | 21798944 |
| AT1G20850.1 | OQU89582 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035689_P001 | Maize | extracellular | 87.6 | 86.21 |
| Os05t0108600-01 | Rice | extracellular | 76.28 | 79.05 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 73.32 | 77.27 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 72.78 | 76.92 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 72.51 | 76.64 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 71.43 | 74.44 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 71.16 | 74.16 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 67.39 | 71.63 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 67.39 | 71.02 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 63.88 | 70.54 |
| Solyc04g082710.2.1 | Tomato | cytosol | 57.68 | 70.16 |
| TraesCS5A01G138700.1 | Wheat | plastid | 71.16 | 70.03 |
| Solyc12g094700.1.1 | Tomato | extracellular | 61.73 | 69.18 |
| EES02142 | Sorghum | vacuole | 69.27 | 67.99 |
| KRH60879 | Soybean | endoplasmic reticulum | 63.61 | 67.62 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 65.23 | 67.6 |
| PGSC0003DMT400075600 | Potato | vacuole | 63.34 | 67.34 |
| KRH60878 | Soybean | endoplasmic reticulum | 63.34 | 67.34 |
| KRH51560 | Soybean | endoplasmic reticulum | 63.07 | 66.86 |
| CDY31861 | Canola | endoplasmic reticulum | 63.61 | 66.86 |
| CDY01351 | Canola | endoplasmic reticulum | 63.07 | 66.67 |
| CDX75496 | Canola | endoplasmic reticulum | 63.88 | 66.57 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 63.61 | 66.48 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 63.61 | 66.29 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 63.61 | 66.29 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 63.61 | 66.29 |
| KRH51561 | Soybean | endoplasmic reticulum | 62.53 | 66.29 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 62.53 | 65.91 |
| CDX96617 | Canola | endoplasmic reticulum | 57.95 | 65.75 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 62.53 | 65.72 |
| CDY33651 | Canola | endoplasmic reticulum | 57.68 | 65.64 |
| CDX69132 | Canola | plastid | 64.15 | 62.63 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 61.46 | 61.79 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 63.61 | 60.36 |
| EES07368 | Sorghum | extracellular | 55.8 | 58.15 |
| CDY31498 | Canola | cytosol | 43.67 | 54.18 |
| KXG19778 | Sorghum | cytosol, nucleus, plastid | 41.78 | 50.32 |
| EES15197 | Sorghum | endoplasmic reticulum | 49.33 | 49.19 |
| KXG19775 | Sorghum | extracellular | 44.47 | 48.53 |
| EES10550 | Sorghum | extracellular | 44.47 | 48.53 |
| EES09937 | Sorghum | endoplasmic reticulum | 48.25 | 48.25 |
| EER89590 | Sorghum | extracellular | 44.2 | 48.24 |
| KXG19777 | Sorghum | extracellular | 43.94 | 47.94 |
| OQU81187 | Sorghum | endoplasmic reticulum, extracellular | 44.2 | 47.26 |
| OQU81188 | Sorghum | cytosol, nucleus, plastid | 35.04 | 47.1 |
| EES10463 | Sorghum | endoplasmic reticulum | 42.86 | 47.04 |
| EES01927 | Sorghum | extracellular | 46.63 | 46.88 |
| KXG25862 | Sorghum | endoplasmic reticulum | 42.32 | 46.59 |
| KXG25863 | Sorghum | endoplasmic reticulum | 42.32 | 46.59 |
| KXG25861 | Sorghum | endoplasmic reticulum | 42.32 | 46.59 |
| EES10461 | Sorghum | endoplasmic reticulum | 42.32 | 46.45 |
| EER90747 | Sorghum | endoplasmic reticulum | 47.17 | 45.93 |
| KXG20680 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 44.2 | 45.81 |
| EER88857 | Sorghum | endoplasmic reticulum | 42.32 | 42.2 |
| EER93437 | Sorghum | endoplasmic reticulum | 39.35 | 41.36 |
| KXG27269 | Sorghum | endoplasmic reticulum | 49.6 | 39.66 |
| EER88858 | Sorghum | golgi, vacuole | 42.05 | 39.29 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 46.63 | 37.05 |
| EES11628 | Sorghum | extracellular | 46.36 | 36.52 |
| EES18460 | Sorghum | endoplasmic reticulum | 42.86 | 34.42 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | EntrezGene:8068658 | UniProt:A0A1B6P5Q3 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlants:KXG21060 | ProteinID:KXG21060 | ProteinID:KXG21060.2 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF427 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | EnsemblPlantsGene:SORBI_3009G008800 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A88C96 | RefSeq:XP_002439128.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:814416..816070
Molecular Weight (calculated)
40539.2 Da
IEP (calculated)
5.039
GRAVY (calculated)
-0.410
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSARPVV AAVLLLCLLC GGSAWLQAAA EARPPHHMDS DSDDFFSIVG YSPEDLVHHD RLIKLFEEWV AKYRKAYASF EEKLHRFEVF KDNLHHIDEA
101: NKKVTTYWLG LNAFADLTHD EFKATYLGLR QPETKKTTDS RFRYGGVADD DVPASVDWRK KGAVTDVKNQ GQCGSCWAFS TVAAVEGINQ IVTGNLTSLS
201: EQELVDCSTD GNNGCNGGVM DNAFSYIASS GGLRTEEAYP YLMEEGDCDD KARDGEQVVT ISGYEDVPAN DEQALVKALA HQPLSVAIEA SGRHFQFYSG
301: GVFNGPCGSE LDHGVAAVGY GSSKGQDYII VKNSWGSHWG EKGYIRMKRG TGKPEGLCGI NKMASYPTKD Q
101: NKKVTTYWLG LNAFADLTHD EFKATYLGLR QPETKKTTDS RFRYGGVADD DVPASVDWRK KGAVTDVKNQ GQCGSCWAFS TVAAVEGINQ IVTGNLTSLS
201: EQELVDCSTD GNNGCNGGVM DNAFSYIASS GGLRTEEAYP YLMEEGDCDD KARDGEQVVT ISGYEDVPAN DEQALVKALA HQPLSVAIEA SGRHFQFYSG
301: GVFNGPCGSE LDHGVAAVGY GSSKGQDYII VKNSWGSHWG EKGYIRMKRG TGKPEGLCGI NKMASYPTKD Q
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.