Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 98.01 | 98.01 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 97.44 | 97.16 |
| TraesCS5A01G138700.1 | Wheat | plastid | 91.17 | 84.88 |
| Os05t0108600-01 | Rice | extracellular | 79.49 | 77.93 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 80.34 | 76.42 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 76.64 | 72.51 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 72.08 | 72.49 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 70.66 | 70.45 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 66.95 | 69.94 |
| Solyc12g094700.1.1 | Tomato | extracellular | 65.81 | 69.79 |
| Solyc04g082710.2.1 | Tomato | cytosol | 60.4 | 69.51 |
| Zm00001d035689_P001 | Maize | extracellular | 74.36 | 69.23 |
| KRH60879 | Soybean | endoplasmic reticulum | 67.81 | 68.19 |
| CDY01351 | Canola | endoplasmic reticulum | 68.09 | 68.09 |
| PGSC0003DMT400075600 | Potato | vacuole | 67.52 | 67.91 |
| CDY31861 | Canola | endoplasmic reticulum | 67.81 | 67.42 |
| KRH60878 | Soybean | endoplasmic reticulum | 66.95 | 67.34 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 67.52 | 67.33 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 68.09 | 67.32 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 68.66 | 67.32 |
| KRH51560 | Soybean | endoplasmic reticulum | 66.95 | 67.14 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 67.52 | 66.57 |
| CDX75496 | Canola | endoplasmic reticulum | 67.52 | 66.57 |
| KRH51561 | Soybean | endoplasmic reticulum | 66.38 | 66.57 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 66.67 | 66.29 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 66.95 | 66.01 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 66.67 | 65.73 |
| CDX96617 | Canola | endoplasmic reticulum | 60.97 | 65.44 |
| CDY33651 | Canola | endoplasmic reticulum | 60.68 | 65.34 |
| CDX69132 | Canola | plastid | 67.52 | 62.37 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 66.1 | 59.34 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 57.83 | 56.39 |
| CDY31498 | Canola | cytosol | 47.29 | 55.52 |
| TraesCS2A01G054600.1 | Wheat | cytosol, nucleus, plastid | 14.53 | 53.68 |
| TraesCS2A01G054500.1 | Wheat | cytosol, nucleus, plastid | 14.53 | 53.68 |
| TraesCS4A01G273900.1 | Wheat | cytosol, nucleus, plastid | 13.96 | 51.58 |
| TraesCS2A01G054800.1 | Wheat | cytosol, mitochondrion, nucleus | 21.65 | 51.35 |
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 52.99 | 51.1 |
| TraesCS3A01G348500.1 | Wheat | endoplasmic reticulum | 52.99 | 51.1 |
| TraesCS6A01G346400.1 | Wheat | cytosol | 13.68 | 50.53 |
| TraesCS4A01G238600.1 | Wheat | nucleus | 50.43 | 48.63 |
| TraesCS4A01G274000.1 | Wheat | extracellular | 46.44 | 47.8 |
| TraesCS6A01G154300.1 | Wheat | extracellular | 46.44 | 47.66 |
| TraesCS4A01G274100.1 | Wheat | extracellular | 45.58 | 47.62 |
| TraesCS4A01G273800.1 | Wheat | extracellular | 45.58 | 46.92 |
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 48.72 | 46.34 |
| TraesCS3A01G412900.1 | Wheat | endoplasmic reticulum | 49.57 | 46.15 |
| TraesCS6A01G345600.1 | Wheat | cytosol, mitochondrion, nucleus | 19.37 | 45.95 |
| TraesCS3A01G413200.1 | Wheat | endoplasmic reticulum | 49.0 | 45.87 |
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 45.01 | 45.66 |
| TraesCS6A01G346800.1 | Wheat | extracellular | 43.87 | 45.43 |
| TraesCS2A01G056000.1 | Wheat | endoplasmic reticulum, extracellular | 43.02 | 45.07 |
| TraesCS2A01G054700.1 | Wheat | cytosol, mitochondrion, nucleus | 13.68 | 44.86 |
| TraesCS1A01G223500.1 | Wheat | extracellular | 43.3 | 44.84 |
| TraesCS6A01G346600.1 | Wheat | extracellular | 43.02 | 44.54 |
| TraesCS6A01G345900.1 | Wheat | extracellular | 43.02 | 44.54 |
| TraesCS6A01G346500.1 | Wheat | extracellular | 35.61 | 44.48 |
| TraesCS4A01G273700.1 | Wheat | extracellular | 35.61 | 41.25 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 49.86 | 37.96 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 50.43 | 37.34 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 49.86 | 37.31 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 49.57 | 37.18 |
| TraesCS2A01G545700.1 | Wheat | unclear | 49.0 | 36.44 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 45.87 | 35.54 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF427 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS1A01G027300 | EnsemblPlants:TraesCS1A01G027300.1 | TIGR:cd02248 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1A:+:12918542..12920058
Molecular Weight (calculated)
38211.8 Da
IEP (calculated)
5.280
GRAVY (calculated)
-0.322
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKLSVAVL LLCVGVCVAR NSDFSIVGYS EEDLSSHDRL IELFEKWLAK HQKAYASFEE KLHRFEVFKD NLKLIDEINR EVTSYWLGLN EFADLTHDEF
101: KAAYLGLSPP PASRSSSRSF RYEDLSARDL PKEVDWRKKG AVTDVKNQGQ CGSCWAFSTV AAVEGINAIV TGNLTALSEQ ELIDCSVDGN SGCNGGMMDY
201: AFSYIASSGG LHTEEAYPYL MEEGSCGDGK KSESEAVSIS GYEDVPAKDE QALIKALAHQ PVSVAIEASG RHFQFYSGGV FDGPCGAHLD HGVAAVGYGS
301: DKGKGHDYII VKNSWGAKWG EKGYIRMKRA TGKGEGLCGI NKMASYPTKD N
101: KAAYLGLSPP PASRSSSRSF RYEDLSARDL PKEVDWRKKG AVTDVKNQGQ CGSCWAFSTV AAVEGINAIV TGNLTALSEQ ELIDCSVDGN SGCNGGMMDY
201: AFSYIASSGG LHTEEAYPYL MEEGSCGDGK KSESEAVSIS GYEDVPAKDE QALIKALAHQ PVSVAIEASG RHFQFYSGGV FDGPCGAHLD HGVAAVGYGS
301: DKGKGHDYII VKNSWGAKWG EKGYIRMKRA TGKGEGLCGI NKMASYPTKD N
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.